fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15210.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020175 not found in 334aa AT3G28920.1 1st_not 0.506726457 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G15210.1     MDVIATTTTIVSDLDS-------------RQPEIE--APIRIQPAKPISFSNG--KR--C
pt020175_POPTR_ MDITPATATATATGTATTPTNNNTNTTIPKSPEADTGTPTRIPQTKPLSFTNGVLKRHHP
                **: .:*:* .:   :             :.** :  :* **  :**:**:**  **   

AT5G15210.1     HHHHLASEAV---AVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACG
pt020175_POPTR_ HHHHLHNHFAPPPVVITYKECLKNHAATIGGHALDGCGEFMPSPTATHTDPTSLKCAACG
                ***** .. .   .* *********** ****************: . .**:**.*****

AT5G15210.1     CHRNFHRRE-EDPSSLSAIVPAIEFRPHNRHQLPPPPPPHLAGIRSPDDDDSASPPPISS
pt020175_POPTR_ CHRNFHRREPEDSPPHTTAITTIEYQPHHRHH-PPPPQAHPQHNRSP---NSASPPPISS
                ********* **... :: :.:**::**:**: **** .*    ***   :*********

AT5G15210.1     SY------MLLALSGGRGGANTAVPMS---------RKRFRTKFSQYQKEKMFEFSERVG
pt020175_POPTR_ SYYPSAPHMLLALSGGVSGLNENVNINAPPRAGSSPRKRFRTKFSQSQKERMHQFAEKVG
                **      ******** .* *  * :.         ********** ***:*.:*:*:**

AT5G15210.1     WRMPKADDVVVKEFCREIGVDKSVFKVWMHNNKIS-GRSGARRANGGVVVGGV-------
pt020175_POPTR_ WKMQKRDEDLVQEFCNEVGVDRSALKVWMHNNKNSFGKKEHLNGNNDDNIRSSNLENSYS
                *:* * *: :*:***.*:***:*.:******** * *:.   ..*..  : .        

AT5G15210.1     ---------------------GDSRQSVVPTNGSFSST
pt020175_POPTR_ NNESNKDITNNNNNNNHHHFENDSHAAHVGTNGSSSSS
                                     .**: : * **** **:
BoxShade v3.31 C (beta, 970507) Output
AT5G15210.1     M D V I A T T T T I V S D L D S - - - - - - - - - - - - - R Q P E I E - - A P I R I Q P A K P I S F S N G - - K R - - C
pt020175_POPTR_    M D I T P A T A T A T A T G T A T T P T N N N T N T T I P K S P E A D T G T P T R I P Q T K P L S F T N G V L K R H H P
 
AT5G15210.1     H H H H L A S E A V - - - A V A T Y K E C L K N H A A G I G G H A L D G C G E F M P S P S F N S N D P A S L T C A A C G
pt020175_POPTR_    H H H H L H N H F A P P P V V I T Y K E C L K N H A A T I G G H A L D G C G E F M P S P T A T H T D P T S L K C A A C G
 
AT5G15210.1     C H R N F H R R E - E D P S S L S A I V P A I E F R P H N R H Q L P P P P P P H L A G I R S P D D D D S A S P P P I S S
pt020175_POPTR_    C H R N F H R R E P E D S P P H T T A I T T I E Y Q P H H R H H - P P P P Q A H P Q H N R S P - - - N S A S P P P I S S
 
AT5G15210.1     S Y - - - - - - M L L A L S G G R G G A N T A V P M S - - - - - - - - - R K R F R T K F S Q Y Q K E K M F E F S E R V G
pt020175_POPTR_    S Y Y P S A P H M L L A L S G G V S G L N E N V N I N A P P R A G S S P R K R F R T K F S Q S Q K E R M H Q F A E K V G
 
AT5G15210.1     W R M P K A D D V V V K E F C R E I G V D K S V F K V W M H N N K I S - G R S G A R R A N G G V V V G G V - - - - - - -
pt020175_POPTR_    W K M Q K R D E D L V Q E F C N E V G V D R S A L K V W M H N N K N S F G K K E H L N G N N D D N I R S S N L E N S Y S
 
AT5G15210.1     - - - - - - - - - - - - - - - - - - - - - G D S R Q S V V P T N G S F S S T
pt020175_POPTR_    N N E S N K D I T N N N N N N N H H H F E N D S H A A H V G T N G S S S S S
 
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