fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15210.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020175 not found in 334aa AT3G28920.1 1st_not 0.506726457 II
Pt004187 not found in 340aa AT3G28920.1 not_not 0.502242152 III
Pt004186 not found in 340aa AT3G28920.1 not_not 0.502242152 III
Pt004188 not found in 286aa AT3G28920.1 not_not 0.502242152 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G15210.1     MDVIATTTTIVSDLDS-------------RQPE--IEAPIRIQPAKPISFSNG--KRC--
pt004186_POPTR_ MDMTTTTTTPTPT------NNNNTNTPTPKSPEAYTETPARIHDTKPLSFTNGVLKRHPP
pt004187_POPTR_ MDMTTTTTTPTPT------NNNNTNTPTPKSPEAYTETPARIHDTKPLSFTNGVLKRHPP
pt004188_POPTR_ MDMTTTTTTPTPT------NNNNTNTPTPKSPEAYTETPARIHDTKPLSFTNGVLKRHPP
pt020175_POPTR_ MDITPATATATATGTATTPTNNNTNTTIPKSPEADTGTPTRIPQTKPLSFTNGVLKRHHP
                **: .:*:* ..                 :.**    :* **  :**:**:**  **   

AT5G15210.1     -HHHHLA---SEAVAVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAAC
pt004186_POPTR_ HHHHHHHHHFSPSPIVIAYKECLKNHAATIGGHALDGCGEFMPSPIATHTNPTSLKCAAC
pt004187_POPTR_ HHHHHHHHHFSPSPIVIAYKECLKNHAATIGGHALDGCGEFMPSPIATHTNPTSLKCAAC
pt004188_POPTR_ HHHHHHHHHFSPSPIVIAYKECLKNHAATIGGHALDGCGEFMPSPIATHTNPTSLKCAAC
pt020175_POPTR_ -HHHHLHNHFAPPPVVITYKECLKNHAATIGGHALDGCGEFMPSPTATHTDPTSLKCAAC
                 ****     : .  * :********** ****************  . .:*:**.****

AT5G15210.1     GCHRNFHRRE-EDPSSLSAIVPAIEFRPHNRHQLPPPPPPHLAGIRSPDDDDSASPPPIS
pt004186_POPTR_ GCHRNFHRREPEDSPPHTATTTTIQYQSHHRHHPLPPPQAQPLHNGSP---NSASPPPIS
pt004187_POPTR_ GCHRNFHRREPEDSPPHTATTTTIQYQSHHRHHPLPPPQAQPLHNGSP---NSASPPPIS
pt004188_POPTR_ GCHRNFHRREPEDSPPHTATTTTIQYQSHHRHHPLPPPQAQPLHNGSP---NSASPPPIS
pt020175_POPTR_ GCHRNFHRREPEDSPPHTTAITTIEYQPHHRHHP-PPPQAHPQHNRSP---NSASPPPIS
                ********** **... ::  .:*:::.*:**:  *** .:     **   :********

AT5G15210.1     SSY------MLLALSGGRGG----ANTAVP-----MSRKRFRTKFSQYQKEKMFEFSERV
pt004186_POPTR_ SSYYPSGPHMLLALSGGVSGLNENANINVPPPVGSSPRKRFRTKFSQSQKERMYQFAERV
pt004187_POPTR_ SSYYPSGPHMLLALSGGVSGLNENANINVPPPVGSSPRKRFRTKFSQSQKERMYQFAERV
pt004188_POPTR_ SSYYPSGPHMLLALSGGVSGLNENANINVPPPVGSSPRKRFRTKFSQSQKERMYQFAERV
pt020175_POPTR_ SSYYPSAPHMLLALSGGVSGLNENVNINAPPRAGSSPRKRFRTKFSQSQKERMHQFAEKV
                ***      ******** .*    .*  .*      .********** ***:*.:*:*:*

AT5G15210.1     GWRMPKADDVVVKEFCREIGVDKSVFKVWMHNNKIS-GRSGARRANGGVVVG--------
pt004186_POPTR_ GWKMQKRDEDLVQEFCNEVGVDRGVLKVWMHNNKNSLGKKEHLNGNNNDILRSNNLENSD
pt004187_POPTR_ GWKMQKRDEDLVQEFCNEVGVDRGVLKVWMHNNKNSLGKKEHLNGNNNDILRSNNLENSD
pt004188_POPTR_ GWKMQKRDEDLVQEFCNEVGVDRGVLKVWMHNNKNSL-----------VILA--------
pt020175_POPTR_ GWKMQKRDEDLVQEFCNEVGVDRSALKVWMHNNKNSFGKKEHLNGNNDDNIRSSNLENS-
                **:* * *: :*:***.*:***:..:******** *              :         

AT5G15210.1     -------------------GV----------GDSRQS-VVPTNGSFSST
pt004186_POPTR_ NSNNEANKNITNDNNNGSEGLNHHHNHHHFENESHVGVHVGTNGSSSSS
pt004187_POPTR_ NSNNEANKNITNDNNNGSEGLNHHHNHHHFENESHVGVHVGTNGSSSSS
pt004188_POPTR_ -----------------------------------CGIPFFSFKVCWAS
pt020175_POPTR_ YSNNESNKDITNNNNN--------NNHHHFENDSHAA-HVGTNGSSSSS
                                                    .  . :     ::
BoxShade v3.31 C (beta, 970507) Output
AT5G15210.1     M D V I A T T T T I V S D L D S - - - - - - - - - - - - - R Q P E - - I E A P I R I Q P A K P I S F S N G - - K R C - -
pt004186_POPTR_    M D M T T T T T T P T P T - - - - - - N N N N T N T P T P K S P E A Y T E T P A R I H D T K P L S F T N G V L K R H P P
pt004187_POPTR_    M D M T T T T T T P T P T - - - - - - N N N N T N T P T P K S P E A Y T E T P A R I H D T K P L S F T N G V L K R H P P
pt004188_POPTR_    M D M T T T T T T P T P T - - - - - - N N N N T N T P T P K S P E A Y T E T P A R I H D T K P L S F T N G V L K R H P P
pt020175_POPTR_    M D I T P A T A T A T A T G T A T T P T N N N T N T T I P K S P E A D T G T P T R I P Q T K P L S F T N G V L K R H H P
 
AT5G15210.1     - H H H H L A - - - S E A V A V A T Y K E C L K N H A A G I G G H A L D G C G E F M P S P S F N S N D P A S L T C A A C
pt004186_POPTR_    H H H H H H H H H F S P S P I V I A Y K E C L K N H A A T I G G H A L D G C G E F M P S P I A T H T N P T S L K C A A C
pt004187_POPTR_    H H H H H H H H H F S P S P I V I A Y K E C L K N H A A T I G G H A L D G C G E F M P S P I A T H T N P T S L K C A A C
pt004188_POPTR_    H H H H H H H H H F S P S P I V I A Y K E C L K N H A A T I G G H A L D G C G E F M P S P I A T H T N P T S L K C A A C
pt020175_POPTR_    - H H H H L H N H F A P P P V V I T Y K E C L K N H A A T I G G H A L D G C G E F M P S P T A T H T D P T S L K C A A C
 
AT5G15210.1     G C H R N F H R R E - E D P S S L S A I V P A I E F R P H N R H Q L P P P P P P H L A G I R S P D D D D S A S P P P I S
pt004186_POPTR_    G C H R N F H R R E P E D S P P H T A T T T T I Q Y Q S H H R H H P L P P P Q A Q P L H N G S P - - - N S A S P P P I S
pt004187_POPTR_    G C H R N F H R R E P E D S P P H T A T T T T I Q Y Q S H H R H H P L P P P Q A Q P L H N G S P - - - N S A S P P P I S
pt004188_POPTR_    G C H R N F H R R E P E D S P P H T A T T T T I Q Y Q S H H R H H P L P P P Q A Q P L H N G S P - - - N S A S P P P I S
pt020175_POPTR_    G C H R N F H R R E P E D S P P H T T A I T T I E Y Q P H H R H H P - P P P Q A H P Q H N R S P - - - N S A S P P P I S
 
AT5G15210.1     S S Y - - - - - - M L L A L S G G R G G - - - - A N T A V P - - - - - M S R K R F R T K F S Q Y Q K E K M F E F S E R V
pt004186_POPTR_    S S Y Y P S G P H M L L A L S G G V S G L N E N A N I N V P P P V G S S P R K R F R T K F S Q S Q K E R M Y Q F A E R V
pt004187_POPTR_    S S Y Y P S G P H M L L A L S G G V S G L N E N A N I N V P P P V G S S P R K R F R T K F S Q S Q K E R M Y Q F A E R V
pt004188_POPTR_    S S Y Y P S G P H M L L A L S G G V S G L N E N A N I N V P P P V G S S P R K R F R T K F S Q S Q K E R M Y Q F A E R V
pt020175_POPTR_    S S Y Y P S A P H M L L A L S G G V S G L N E N V N I N A P P R A G S S P R K R F R T K F S Q S Q K E R M H Q F A E K V
 
AT5G15210.1     G W R M P K A D D V V V K E F C R E I G V D K S V F K V W M H N N K I S - G R S G A R R A N G G V V V G - - - - - - - -
pt004186_POPTR_    G W K M Q K R D E D L V Q E F C N E V G V D R G V L K V W M H N N K N S L G K K E H L N G N N N D I L R S N N L E N S D
pt004187_POPTR_    G W K M Q K R D E D L V Q E F C N E V G V D R G V L K V W M H N N K N S L G K K E H L N G N N N D I L R S N N L E N S D
pt004188_POPTR_    G W K M Q K R D E D L V Q E F C N E V G V D R G V L K V W M H N N K N S L - - - - - - - - - - - V I L A - - - - - - - -
pt020175_POPTR_    G W K M Q K R D E D L V Q E F C N E V G V D R S A L K V W M H N N K N S F G K K E H L N G N N D D N I R S S N L E N S -
 
AT5G15210.1     - - - - - - - - - - - - - - - - - - - G V - - - - - - - - - - G D S R Q S - V V P T N G S F S S T
pt004186_POPTR_    N S N N E A N K N I T N D N N N G S E G L N H H H N H H H F E N E S H V G V H V G T N G S S S S S
pt004187_POPTR_    N S N N E A N K N I T N D N N N G S E G L N H H H N H H H F E N E S H V G V H V G T N G S S S S S
pt004188_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C G I P F F S F K V C W A S
pt020175_POPTR_    Y S N N E S N K D I T N N N N N - - - - - - - - N N H H H F E N D S H A A - H V G T N G S S S S S
 
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