fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15210.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035046 not found in 331aa AT3G28920.1 not_not 0.495515695 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G15210.1     MDVIATTTTIV-SDLDSRQPEIEAPIRIQP-----AKPISFSNG--KRCHHHHLASEAVA
gm035046_Glyma1 MEIITPTATATNATAKSPEPDIETMTRIHQNPNPNPKPVSFSNGVLKRHHVNHRAA----
                *::*:.*:* . :  .* :*:**:  **:      .**:*****  ** * :* *:    

AT5G15210.1     VATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRREEDPSS
gm035046_Glyma1 -VVYKECLKNHVASLGGHALDGCGEFMPSPAATADDPSSIKCAACGCHRNFHRREPEESP
                 ..********.*.:***************: .::**:*:.************** : *.

AT5G15210.1     LSAIVPA----IEFRPHNRHQLPPPPPPHLAGIRSPDDDDSASPPPISS----SYMLLAL
gm035046_Glyma1 IS---PATHHVLEYRPHHRHH---PPPPH----RSP---NSASPPPISSYPSAPHMLLAL
                :*   **    :*:***:**:   *****    ***   :*********    .:*****

AT5G15210.1     SGGRGGA----NTAVPM----SRKRFRTKFSQYQKEKMFEFSERVGWRMPKADDVVVKEF
gm035046_Glyma1 SGGAGLSVAPENTAAPAPPHHSRKRFRTKFTQEQKEKMHEFADKVGWKMQRRDEEMVMEF
                *** * :    ***.*     *********:* *****.**:::***:* : *: :* **

AT5G15210.1     CREIGVDKSVFKVWMHNNK--------ISGRS----GARRANGGVVVGGVGDS--RQSV-
gm035046_Glyma1 CNEIGVDRGVLKVWMHNNKNTFAKKDNLNGNSIGNVAIVSANGVAPIGAVGSATVRSSVH
                *.*****:.*:********        :.*.*    .   *** . :*.**.:  *.** 

AT5G15210.1     -------------------VP--------------------TNGSFSST
gm035046_Glyma1 VHEHEHGGINGNGSGDNNHNPLGSRDVNEYENDSGTNGGGGTNGSSSSS
                                    *                    **** **:
BoxShade v3.31 C (beta, 970507) Output
AT5G15210.1     M D V I A T T T T I V - S D L D S R Q P E I E A P I R I Q P - - - - - A K P I S F S N G - - K R C H H H H L A S E A V A
gm035046_Glyma1    M E I I T P T A T A T N A T A K S P E P D I E T M T R I H Q N P N P N P K P V S F S N G V L K R H H V N H R A A - - - -
 
AT5G15210.1     V A T Y K E C L K N H A A G I G G H A L D G C G E F M P S P S F N S N D P A S L T C A A C G C H R N F H R R E E D P S S
gm035046_Glyma1    - V V Y K E C L K N H V A S L G G H A L D G C G E F M P S P A A T A D D P S S I K C A A C G C H R N F H R R E P E E S P
 
AT5G15210.1     L S A I V P A - - - - I E F R P H N R H Q L P P P P P P H L A G I R S P D D D D S A S P P P I S S - - - - S Y M L L A L
gm035046_Glyma1    I S - - - P A T H H V L E Y R P H H R H H - - - P P P P H - - - - R S P - - - N S A S P P P I S S Y P S A P H M L L A L
 
AT5G15210.1     S G G R G G A - - - - N T A V P M - - - - S R K R F R T K F S Q Y Q K E K M F E F S E R V G W R M P K A D D V V V K E F
gm035046_Glyma1    S G G A G L S V A P E N T A A P A P P H H S R K R F R T K F T Q E Q K E K M H E F A D K V G W K M Q R R D E E M V M E F
 
AT5G15210.1     C R E I G V D K S V F K V W M H N N K - - - - - - - - I S G R S - - - - G A R R A N G G V V V G G V G D S - - R Q S V -
gm035046_Glyma1    C N E I G V D R G V L K V W M H N N K N T F A K K D N L N G N S I G N V A I V S A N G V A P I G A V G S A T V R S S V H
 
AT5G15210.1     - - - - - - - - - - - - - - - - - - - V P - - - - - - - - - - - - - - - - - - - - T N G S F S S T
gm035046_Glyma1    V H E H E H G G I N G N G S G D N N H N P L G S R D V N E Y E N D S G T N G G G G T N G S S S S S
 
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