fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15210.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050382 not found in 308aa AT3G28920.1 1st_not 0.520179372 II
Gm035046 not found in 331aa AT3G28920.1 not_not 0.495515695 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G15210.1     MDVIATTTTIVSDL------DSRQPEIEAPIRIQ------PAKPISFSNG--KRCHHHHL
gm035046_Glyma1 MEIITPTATATNAT-----AKSPEPDIETMTRIHQNPNP-NPKPVSFSNGVLKRHHVNH-
gm050382_Glyma1 MD-ITPTTTIINTTTTPSAAKSPEHETETPTRITTPITPTTTKTLSFSNGVLKRHHHHHL
                *: *:.*:*  .        .* : : *:  **        .*.:*****  ** * :* 

AT5G15210.1     ASEAVAVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRR
gm035046_Glyma1 ----RAAVVYKECLKNHVASLGGHALDGCGEFMPSPAATADDPSSIKCAACGCHRNFHRR
gm050382_Glyma1 HHPMPAVVTYKECLKNHAANLGGLALDGCGEFMPSPTATAADPSSIKCAACGCHRNFHRR
                     *...********.*.:** ************: .: **:*:.*************

AT5G15210.1     E-EDPSSLSAIVPAIEFRPHNRHQLPPPPPPHLAG-IRSPDDDDSASPPPISSS------
gm035046_Glyma1 EPEESPISPATHHVLEYRPHHRHH--PPPP------HRSP---NSASPPPISS--YPSAP
gm050382_Glyma1 EPEDPPITSNTTHVIEYQPHHRHH--PPPPLHAAAAARSP---NSASPPPISSSYYPSAP
                * *:..  .    .:*::**:**:  ****       ***   :*********       

AT5G15210.1     YMLLALSGGRGGA----NTAVP----MSRKRFRTKFSQYQKEKMFEFSERVGWRMPKADD
gm035046_Glyma1 HMLLALSGGAGLSVAPENTAAPAPPHHSRKRFRTKFTQEQKEKMHEFADKVGWKMQRRDE
gm050382_Glyma1 HMLLALS--AGLAAPPESTAAPSAA-LSRKRFRTKFSQEQKEKMHKFAEKVGWKIQKRDE
                :******   * :    .**.*     *********:* *****.:*:::***:: : *:

AT5G15210.1     VVVKEFCREIGVDKSVFKVWMHNNKISGRSGARRAN------------------------
gm035046_Glyma1 EMVMEFCNEIGVDRGVLKVWMHNNK---NTFAKKDNLNGNSIGNVAIVSANGVAPIGAVG
gm050382_Glyma1 DLIHEFCNEVGVDRSVLKVWMHNNK---NTFAKKDN-------NIVFENPN---------
                 :: ***.*:***:.*:********   .: *:: *                        

AT5G15210.1     ---------------GGVVVGGVGD---------SRQSV------------VPTNGSFSS
gm035046_Glyma1 SATVRSSVHVHEHEHGGINGNGSGDNNHNPLGSRDVNEYENDSGTNGGG---GTNGSSSS
gm050382_Glyma1 ------------NNHG--SGSGGGE---DPAEDPSRNHY--------GGVNVGANGSSSS
                               *    .* *:         . :                :*** **

AT5G15210.1     T
gm035046_Glyma1 S
gm050382_Glyma1 S
                :
BoxShade v3.31 C (beta, 970507) Output
AT5G15210.1     M D V I A T T T T I V S D L - - - - - - D S R Q P E I E A P I R I Q - - - - - - P A K P I S F S N G - - K R C H H H H L
gm035046_Glyma1    M E I I T P T A T A T N A T - - - - - A K S P E P D I E T M T R I H Q N P N P - N P K P V S F S N G V L K R H H V N H -
gm050382_Glyma1    M D - I T P T T T I I N T T T T P S A A K S P E H E T E T P T R I T T P I T P T T T K T L S F S N G V L K R H H H H H L
 
AT5G15210.1     A S E A V A V A T Y K E C L K N H A A G I G G H A L D G C G E F M P S P S F N S N D P A S L T C A A C G C H R N F H R R
gm035046_Glyma1    - - - - R A A V V Y K E C L K N H V A S L G G H A L D G C G E F M P S P A A T A D D P S S I K C A A C G C H R N F H R R
gm050382_Glyma1    H H P M P A V V T Y K E C L K N H A A N L G G L A L D G C G E F M P S P T A T A A D P S S I K C A A C G C H R N F H R R
 
AT5G15210.1     E - E D P S S L S A I V P A I E F R P H N R H Q L P P P P P P H L A G - I R S P D D D D S A S P P P I S S S - - - - - -
gm035046_Glyma1    E P E E S P I S P A T H H V L E Y R P H H R H H - - P P P P - - - - - - H R S P - - - N S A S P P P I S S - - Y P S A P
gm050382_Glyma1    E P E D P P I T S N T T H V I E Y Q P H H R H H - - P P P P L H A A A A A R S P - - - N S A S P P P I S S S Y Y P S A P
 
AT5G15210.1     Y M L L A L S G G R G G A - - - - N T A V P - - - - M S R K R F R T K F S Q Y Q K E K M F E F S E R V G W R M P K A D D
gm035046_Glyma1    H M L L A L S G G A G L S V A P E N T A A P A P P H H S R K R F R T K F T Q E Q K E K M H E F A D K V G W K M Q R R D E
gm050382_Glyma1    H M L L A L S - - A G L A A P P E S T A A P S A A - L S R K R F R T K F S Q E Q K E K M H K F A E K V G W K I Q K R D E
 
AT5G15210.1     V V V K E F C R E I G V D K S V F K V W M H N N K I S G R S G A R R A N - - - - - - - - - - - - - - - - - - - - - - - -
gm035046_Glyma1    E M V M E F C N E I G V D R G V L K V W M H N N K - - - N T F A K K D N L N G N S I G N V A I V S A N G V A P I G A V G
gm050382_Glyma1    D L I H E F C N E V G V D R S V L K V W M H N N K - - - N T F A K K D N - - - - - - - N I V F E N P N - - - - - - - - -
 
AT5G15210.1     - - - - - - - - - - - - - - - G G V V V G G V G D - - - - - - - - - S R Q S V - - - - - - - - - - - - V P T N G S F S S
gm035046_Glyma1    S A T V R S S V H V H E H E H G G I N G N G S G D N N H N P L G S R D V N E Y E N D S G T N G G G - - - G T N G S S S S
gm050382_Glyma1    - - - - - - - - - - - - N N H G - - S G S G G G E - - - D P A E D P S R N H Y - - - - - - - - G G V N V G A N G S S S S
 
AT5G15210.1     T
gm035046_Glyma1    S
gm050382_Glyma1    S
 
0