fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm022507 not found in 193aa AT3G30530.1 not_not 0.418181818 III
Gm050542 not found in 195aa AT3G30530.1 not_not 0.418181818 III
Gm051143 not found in 220aa AT3G30530.1 not_not 0.410909090 III
Pt003451 not found in 193aa AT3G30530.1 not_not 0.443636363 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G15830.1     MQPNYDSSSLNNMQQQD---YF-NLNNY----YNNLNPS-----TNNNNLN---ILQYP-
gm022507_Glyma0 MQARE-ITGLNYLLPPDPC------FNY-SMVQNTI-PTFQLHKLSNQFYG---LQKPPP
gm050542_Glyma1 MQARE-ITGLNYLLPSDPCPYP---GHY-SMVQNTI-PTFQLHKLSNQFYG---LQN-PP
gm051143_Glyma1 MQSREVVSGLNYLLPSNPCPYPPNNNNYTTMFQNNINPTFQFQRFSNQIYGYNNINNTPY
pt003451_POPTR_ MQPSE-VTGLHYLVPSSPSPYS---ANF-SMSQNDS----QMFQFTNPSYN----SQIPS
                **.    :.*: :   .         ::     *           .*   .     : * 

AT5G15830.1     QIQE--LNLQSPVSNNSTTSDDATEE-IFVINERKQRRMVSNRESARRSRMRKQRHLDEL
gm022507_Glyma0 QVLADFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDEL
gm050542_Glyma1 KVLADFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDEL
gm051143_Glyma1 HKVPDLFSPQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDEL
pt003451_POPTR_ QVQE--FSLQASCMSSISTSDEADEQQLSLINERKQRRMVSNRESARRSRMRKQKHLDEL
                :        *:.  .. :***:* *:   :*****:***:**************:*****

AT5G15830.1     LSQVAWLRSENHQLLDKLNQVSDNNDLVIQENSSLKEENLELRQVITSMKKLGGGIHDKY
gm022507_Glyma0 WSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQ-----LHSPY
gm050542_Glyma1 WSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQ-----LHSPY
gm051143_Glyma1 WSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIRDMQ-----IHSPC
pt003451_POPTR_ WSQVVWFRNENHQLLDKLNHVSECHDRVVHENAQLKEETSGLRQILTDMQ-----LNSPY
                 ***.*:*.*****:****:**  :* * :** .*:*:   ***:: .*:     ::.  

AT5G15830.1     SSP--SSMDELDQDF------------SS---ITDDPRTHHPS---
gm022507_Glyma0 HPPPLSPIDD---DV-----SPYVKSDSS---ITDSL-----DLLG
gm050542_Glyma1 HPPPLSPIDD---DV-----SPYVKSDSS---ITDSL-----DLLG
gm051143_Glyma1 PSSFITPLEDHHHDVDHVIPSAYLRSDSSN-QLSNSCNNNMDDLLG
pt003451_POPTR_ --PLLKDLEDITCD------TAYLGSESSNQSITSSS-----DLLG
                  .  . :::   *             **   ::..      .
BoxShade v3.31 C (beta, 970507) Output
AT5G15830.1     M Q P N Y D S S S L N N M Q Q Q D - - - Y F - N L N N Y - - - - Y N N L N P S - - - - - T N N N N L N - - - I L Q Y P -
gm022507_Glyma0    M Q A R E - I T G L N Y L L P P D P C - - - - - - F N Y - S M V Q N T I - P T F Q L H K L S N Q F Y G - - - L Q K P P P
gm050542_Glyma1    M Q A R E - I T G L N Y L L P S D P C P Y P - - - G H Y - S M V Q N T I - P T F Q L H K L S N Q F Y G - - - L Q N - P P
gm051143_Glyma1    M Q S R E V V S G L N Y L L P S N P C P Y P P N N N N Y T T M F Q N N I N P T F Q F Q R F S N Q I Y G Y N N I N N T P Y
pt003451_POPTR_    M Q P S E - V T G L H Y L V P S S P S P Y S - - - A N F - S M S Q N D S - - - - Q M F Q F T N P S Y N - - - - S Q I P S
 
AT5G15830.1     Q I Q E - - L N L Q S P V S N N S T T S D D A T E E - I F V I N E R K Q R R M V S N R E S A R R S R M R K Q R H L D E L
gm022507_Glyma0    Q V L A D F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E L
gm050542_Glyma1    K V L A D F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E L
gm051143_Glyma1    H K V P D L F S P Q S S C I S S N S T S D E A D E Q N L S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E L
pt003451_POPTR_    Q V Q E - - F S L Q A S C M S S I S T S D E A D E Q Q L S L I N E R K Q R R M V S N R E S A R R S R M R K Q K H L D E L
 
AT5G15830.1     L S Q V A W L R S E N H Q L L D K L N Q V S D N N D L V I Q E N S S L K E E N L E L R Q V I T S M K K L G G G I H D K Y
gm022507_Glyma0    W S Q V V W L R N E N H Q L M D K L N H V S E S H D K V A Q E N V Q L R E E A S E L R Q M I C D M Q - - - - - L H S P Y
gm050542_Glyma1    W S Q V V W L R N E N H Q L M D K L N H V S A S Q D K V V Q E N V Q L R E E A S E L R Q M I C D M Q - - - - - L H S P Y
gm051143_Glyma1    W S Q V V W L R N E N H Q L M D K L N H V S E S H D Q V M Q E N A Q L K E Q A L E L R Q M I R D M Q - - - - - I H S P C
pt003451_POPTR_    W S Q V V W F R N E N H Q L L D K L N H V S E C H D R V V H E N A Q L K E E T S G L R Q I L T D M Q - - - - - L N S P Y
 
AT5G15830.1     S S P - - S S M D E L D Q D F - - - - - - - - - - - - S S - - - I T D D P R T H H P S - - -
gm022507_Glyma0    H P P P L S P I D D - - - D V - - - - - S P Y V K S D S S - - - I T D S L - - - - - D L L G
gm050542_Glyma1    H P P P L S P I D D - - - D V - - - - - S P Y V K S D S S - - - I T D S L - - - - - D L L G
gm051143_Glyma1    P S S F I T P L E D H H H D V D H V I P S A Y L R S D S S N - Q L S N S C N N N M D D L L G
pt003451_POPTR_    - - P L L K D L E D I T C D - - - - - - T A Y L G S E S S N Q S I T S S S - - - - - D L L G
 
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