fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035172 not found in 214aa AT3G30530.1 1st_not 0.421818181 II
Gm022507 not found in 193aa AT3G30530.1 not_not 0.418181818 III
Gm050542 not found in 195aa AT3G30530.1 not_not 0.418181818 III
Gm051143 not found in 220aa AT3G30530.1 not_not 0.410909090 III
Pt019238 not found in 196aa AT3G30530.1 1st_not 0.454545454 II
Pt003451 not found in 193aa AT3G30530.1 not_not 0.443636363 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G15830.1     MQPNYDSSSLN------------------NMQQQDY---FNLNNYYNNLNPSTNNNNLNI
gm050542_Glyma1 MQARE-ITGLNYLLPSDPCPYPG---HY-SMVQNTI-PTFQLHKLSNQFYGLQN------
gm022507_Glyma0 MQARE-ITGLNYLLPPDPC---F---NY-SMVQNTI-PTFQLHKLSNQFYGLQK------
gm035172_Glyma1 MQTKEVVSSLSYLLPSNPCSYPP-SNNYTSMIQNSI-PTFQFQRFSNQIYGCNNSHN---
gm051143_Glyma1 MQSREVVSGLNYLLPSNPCPYPPNNNNYTTMFQNNINPTFQFQRFSNQIYGYNNINN---
pt019238_POPTR_ MQPNE-IAGLHYLVPPNSSPYSA---HF-SMTQDNS-QMFQFNQFTNQSYNFQI------
pt003451_POPTR_ MQPSE-VTGLHYLVPSSPSPYSA---NF-SMSQNDS-QMF---QFTNPSYNSQI------
                **.    :.*                   .* *:     *   .  *             

AT5G15830.1     LQYPQIQE-LN-LQSPVSNNSTTSDDATEE-IFVINERKQRRMVSNRESARRSRMRKQRH
gm050542_Glyma1 -PPKVLAD-FSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKH
gm022507_Glyma0 PPPQVLAD-FSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKH
gm035172_Glyma1 TTY-QVPD-FS-PQSSCISSNSTSDEADDQNLSLINERKHRRMLSNRESARRSRMRKQKH
gm051143_Glyma1 TPYHKVPDLFS-PQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKH
pt019238_POPTR_ -PP-QLQE-FS-LQASCMSSHSTSDEADEQQLSLINERKQRRMISNRESARRSRMRKQKH
pt003451_POPTR_ -PS-QVQE-FS-LQASCMSSISTSDEADEQQLSLINERKQRRMVSNRESARRSRMRKQKH
                     : : :.  *:.  .. :***:* ::   :*****:***:**************:*

AT5G15830.1     LDELLSQVAWLRSENHQLLDKLNQVSDNNDLVIQENSSLKEENLELRQVITSMKKLGGGI
gm050542_Glyma1 LDELWSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQ-----L
gm022507_Glyma0 LDELWSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQ-----L
gm035172_Glyma1 LDELWSQVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQ-----I
gm051143_Glyma1 LDELWSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIRDMQ-----I
pt019238_POPTR_ LDELWSQVVWLRNENHQLVDKVNHVSECHDQVVQENNQLKEEISELRQVLTDMQ-----L
pt003451_POPTR_ LDELWSQVVWFRNENHQLLDKLNHVSECHDRVVHENAQLKEETSGLRQILTDMQ-----L
                **** ***.*:*.*****:**:*:**  :* * :** .*:*:   ***:: .*:     :

AT5G15830.1     HDKYSSPSS-MDELDQ---DFS------------------SITD---DPRTHHPS
gm050542_Glyma1 HSPYHPPP--LSPIDD---DV-----SPYVKSDS------SITDSL-DLLG----
gm022507_Glyma0 HSPYHPPP--LSPIDD---DV-----SPYVKSDS------SITDSL-DLLG----
gm035172_Glyma1 HSPCGGPNSFITPLED--HDVDHV-PSAYLRSDDSSNQFNSCNNNM-DLLG----
gm051143_Glyma1 HSPC--PSSFITPLEDHHHDVDHVIPSAYLRSDSSNQLSNSCNNNMDDLLG----
pt019238_POPTR_ SSPY--PS--LKGLEDITCD------TAYLRAESSNQ---SITSSS-DLLG----
pt003451_POPTR_ NSPY--PL--LKDLEDITCD------TAYLGSESSNQ---SITSSS-DLLG----
                 .    *   :  :::   *                    * ..   *
BoxShade v3.31 C (beta, 970507) Output
AT5G15830.1     M Q P N Y D S S S L N - - - - - - - - - - - - - - - - - - N M Q Q Q D Y - - - F N L N N Y Y N N L N P S T N N N N L N I
gm050542_Glyma1    M Q A R E - I T G L N Y L L P S D P C P Y P G - - - H Y - S M V Q N T I - P T F Q L H K L S N Q F Y G L Q N - - - - - -
gm022507_Glyma0    M Q A R E - I T G L N Y L L P P D P C - - - F - - - N Y - S M V Q N T I - P T F Q L H K L S N Q F Y G L Q K - - - - - -
gm035172_Glyma1    M Q T K E V V S S L S Y L L P S N P C S Y P P - S N N Y T S M I Q N S I - P T F Q F Q R F S N Q I Y G C N N S H N - - -
gm051143_Glyma1    M Q S R E V V S G L N Y L L P S N P C P Y P P N N N N Y T T M F Q N N I N P T F Q F Q R F S N Q I Y G Y N N I N N - - -
pt019238_POPTR_    M Q P N E - I A G L H Y L V P P N S S P Y S A - - - H F - S M T Q D N S - Q M F Q F N Q F T N Q S Y N F Q I - - - - - -
pt003451_POPTR_    M Q P S E - V T G L H Y L V P S S P S P Y S A - - - N F - S M S Q N D S - Q M F - - - Q F T N P S Y N S Q I - - - - - -
 
AT5G15830.1     L Q Y P Q I Q E - L N - L Q S P V S N N S T T S D D A T E E - I F V I N E R K Q R R M V S N R E S A R R S R M R K Q R H
gm050542_Glyma1    - P P K V L A D - F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K H
gm022507_Glyma0    P P P Q V L A D - F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K H
gm035172_Glyma1    T T Y - Q V P D - F S - P Q S S C I S S N S T S D E A D D Q N L S L I N E R K H R R M L S N R E S A R R S R M R K Q K H
gm051143_Glyma1    T P Y H K V P D L F S - P Q S S C I S S N S T S D E A D E Q N L S L I N E R K H R R M I S N R E S A R R S R M R K Q K H
pt019238_POPTR_    - P P - Q L Q E - F S - L Q A S C M S S H S T S D E A D E Q Q L S L I N E R K Q R R M I S N R E S A R R S R M R K Q K H
pt003451_POPTR_    - P S - Q V Q E - F S - L Q A S C M S S I S T S D E A D E Q Q L S L I N E R K Q R R M V S N R E S A R R S R M R K Q K H
 
AT5G15830.1     L D E L L S Q V A W L R S E N H Q L L D K L N Q V S D N N D L V I Q E N S S L K E E N L E L R Q V I T S M K K L G G G I
gm050542_Glyma1    L D E L W S Q V V W L R N E N H Q L M D K L N H V S A S Q D K V V Q E N V Q L R E E A S E L R Q M I C D M Q - - - - - L
gm022507_Glyma0    L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D K V A Q E N V Q L R E E A S E L R Q M I C D M Q - - - - - L
gm035172_Glyma1    L D E L W S Q V V W L R N E N H Q L I D K L N H V S E T H D Q V L Q E N S Q L K E E A S E L R Q M I R D M Q - - - - - I
gm051143_Glyma1    L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D Q V M Q E N A Q L K E Q A L E L R Q M I R D M Q - - - - - I
pt019238_POPTR_    L D E L W S Q V V W L R N E N H Q L V D K V N H V S E C H D Q V V Q E N N Q L K E E I S E L R Q V L T D M Q - - - - - L
pt003451_POPTR_    L D E L W S Q V V W F R N E N H Q L L D K L N H V S E C H D R V V H E N A Q L K E E T S G L R Q I L T D M Q - - - - - L
 
AT5G15830.1     H D K Y S S P S S - M D E L D Q - - - D F S - - - - - - - - - - - - - - - - - - S I T D - - - D P R T H H P S
gm050542_Glyma1    H S P Y H P P P - - L S P I D D - - - D V - - - - - S P Y V K S D S - - - - - - S I T D S L - D L L G - - - -
gm022507_Glyma0    H S P Y H P P P - - L S P I D D - - - D V - - - - - S P Y V K S D S - - - - - - S I T D S L - D L L G - - - -
gm035172_Glyma1    H S P C G G P N S F I T P L E D - - H D V D H V - P S A Y L R S D D S S N Q F N S C N N N M - D L L G - - - -
gm051143_Glyma1    H S P C - - P S S F I T P L E D H H H D V D H V I P S A Y L R S D S S N Q L S N S C N N N M D D L L G - - - -
pt019238_POPTR_    S S P Y - - P S - - L K G L E D I T C D - - - - - - T A Y L R A E S S N Q - - - S I T S S S - D L L G - - - -
pt003451_POPTR_    N S P Y - - P L - - L K D L E D I T C D - - - - - - T A Y L G S E S S N Q - - - S I T S S S - D L L G - - - -
 
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