fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019238 not found in 196aa AT3G30530.1 1st_not 0.454545454 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G15830.1     MQPN------------------YDSSSLNNMQQQDYFNLNNYYNNLNPSTNNNNLNILQY
pt019238_POPTR_ MQPNEIAGLHYLVPPNSSPYSAHFSMTQDNSQM---FQFNQF--------TNQSYNFQIP
                ****                  : * : :* *    *::*::        .*:. *:   

AT5G15830.1     PQIQELNLQSPVSNNSTTSDDATE-EIFVINERKQRRMVSNRESARRSRMRKQRHLDELL
pt019238_POPTR_ PQLQEFSLQASCMSSHSTSDEADEQQLSLINERKQRRMISNRESARRSRMRKQKHLDELW
                **:**:.**:.  .. :***:* * :: :*********:**************:***** 

AT5G15830.1     SQVAWLRSENHQLLDKLNQVSDNNDLVIQENSSLKEENLELRQVITSMKKLGGGIHDKYS
pt019238_POPTR_ SQVVWLRNENHQLVDKVNHVSECHDQVVQENNQLKEEISELRQVLTDMQ-----LSSPYP
                ***.***.*****:**:*:**: :* *:***..****  *****:*.*:     : . *.

AT5G15830.1     SPSSMDELDQDFSSITDDPRTHHPS-------
pt019238_POPTR_ SLKGLEDITCDTAYLRAESSNQSITSSSDLLG
                * ..::::  * : :  :. .:  :
BoxShade v3.31 C (beta, 970507) Output
AT5G15830.1     M Q P N - - - - - - - - - - - - - - - - - - Y D S S S L N N M Q Q Q D Y F N L N N Y Y N N L N P S T N N N N L N I L Q Y
pt019238_POPTR_    M Q P N E I A G L H Y L V P P N S S P Y S A H F S M T Q D N S Q M - - - F Q F N Q F - - - - - - - - T N Q S Y N F Q I P
 
AT5G15830.1     P Q I Q E L N L Q S P V S N N S T T S D D A T E - E I F V I N E R K Q R R M V S N R E S A R R S R M R K Q R H L D E L L
pt019238_POPTR_    P Q L Q E F S L Q A S C M S S H S T S D E A D E Q Q L S L I N E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L W
 
AT5G15830.1     S Q V A W L R S E N H Q L L D K L N Q V S D N N D L V I Q E N S S L K E E N L E L R Q V I T S M K K L G G G I H D K Y S
pt019238_POPTR_    S Q V V W L R N E N H Q L V D K V N H V S E C H D Q V V Q E N N Q L K E E I S E L R Q V L T D M Q - - - - - L S S P Y P
 
AT5G15830.1     S P S S M D E L D Q D F S S I T D D P R T H H P S - - - - - - -
pt019238_POPTR_    S L K G L E D I T C D T A Y L R A E S S N Q S I T S S S D L L G
 
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