fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003451 not found in 193aa AT3G30530.1 not_not 0.443636363 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G15830.1     MQPNYDSSSLN--------------NMQQQDYFNLNNYYNNLNPSTNNNNLNILQYP-QI
pt003451_POPTR_ MQPS-EVTGLHYLVPSSPSPYSANFSMSQND----SQMFQFTNPSYNS------QIPSQV
                ***. : :.*:              .*.*:*    .: ::  *** *.      * * *:

AT5G15830.1     QELNLQSPVSNNSTTSDDATE-EIFVINERKQRRMVSNRESARRSRMRKQRHLDELLSQV
pt003451_POPTR_ QEFSLQASCMSSISTSDEADEQQLSLINERKQRRMVSNRESARRSRMRKQKHLDELWSQV
                **:.**:.  .. :***:* * :: :************************:***** ***

AT5G15830.1     AWLRSENHQLLDKLNQVSDNNDLVIQENSSLKEENLELRQVITSMKKLGGGIHDKYSSPS
pt003451_POPTR_ VWFRNENHQLLDKLNHVSECHDRVVHENAQLKEETSGLRQILTDMQ-----LNSPYPLLK
                .*:*.**********:**: :* *::**:.****.  ***::*.*:     ::. *.  .

AT5G15830.1     SMDELDQDFSSITDDPRTHHPS-------
pt003451_POPTR_ DLEDITCDTAYLGSESSNQSITSSSDLLG
                .::::  * : : .:. .:  :
BoxShade v3.31 C (beta, 970507) Output
AT5G15830.1     M Q P N Y D S S S L N - - - - - - - - - - - - - - N M Q Q Q D Y F N L N N Y Y N N L N P S T N N N N L N I L Q Y P - Q I
pt003451_POPTR_    M Q P S - E V T G L H Y L V P S S P S P Y S A N F S M S Q N D - - - - S Q M F Q F T N P S Y N S - - - - - - Q I P S Q V
 
AT5G15830.1     Q E L N L Q S P V S N N S T T S D D A T E - E I F V I N E R K Q R R M V S N R E S A R R S R M R K Q R H L D E L L S Q V
pt003451_POPTR_    Q E F S L Q A S C M S S I S T S D E A D E Q Q L S L I N E R K Q R R M V S N R E S A R R S R M R K Q K H L D E L W S Q V
 
AT5G15830.1     A W L R S E N H Q L L D K L N Q V S D N N D L V I Q E N S S L K E E N L E L R Q V I T S M K K L G G G I H D K Y S S P S
pt003451_POPTR_    V W F R N E N H Q L L D K L N H V S E C H D R V V H E N A Q L K E E T S G L R Q I L T D M Q - - - - - L N S P Y P L L K
 
AT5G15830.1     S M D E L D Q D F S S I T D D P R T H H P S - - - - - - -
pt003451_POPTR_    D L E D I T C D T A Y L G S E S S N Q S I T S S S D L L G
 
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