fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019238 not found in 196aa AT3G30530.1 1st_not 0.454545454 II
Pt003451 not found in 193aa AT3G30530.1 not_not 0.443636363 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G15830.1     MQPNYDS-------------SSLNNMQQQD--YFNLNNYYNNLNPSTNNNNLNILQYP-Q
pt019238_POPTR_ MQPNEIAGLHYLVPPNSSPYSAHFSMTQDNSQMFQFNQF---TNQSYN------FQIPPQ
pt003451_POPTR_ MQPSEVTGLHYLVPSSPSPYSANFSMSQNDSQMF---QF---TNPSYN------SQIPSQ
                ***.  :             *:  .* *::   *   ::    * * *       * * *

AT5G15830.1     IQELNLQSPVSNNSTTSDDATE-EIFVINERKQRRMVSNRESARRSRMRKQRHLDELLSQ
pt019238_POPTR_ LQEFSLQASCMSSHSTSDEADEQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQ
pt003451_POPTR_ VQEFSLQASCMSSISTSDEADEQQLSLINERKQRRMVSNRESARRSRMRKQKHLDELWSQ
                :**:.**:.  .. :***:* * :: :*********:**************:***** **

AT5G15830.1     VAWLRSENHQLLDKLNQVSDNNDLVIQENSSLKEENLELRQVITSMKKLGGGIHDKYSSP
pt019238_POPTR_ VVWLRNENHQLVDKVNHVSECHDQVVQENNQLKEEISELRQVLTDMQ-----LSSPYPSL
pt003451_POPTR_ VVWFRNENHQLLDKLNHVSECHDRVVHENAQLKEETSGLRQILTDMQ-----LNSPYPLL
                *.*:*.*****:**:*:**: :* *::** .****   ***::*.*:     : . *.  

AT5G15830.1     SSMDELDQDFSSITDDPRTHHPS-------
pt019238_POPTR_ KGLEDITCDTAYLRAESSNQSITSSSDLLG
pt003451_POPTR_ KDLEDITCDTAYLGSESSNQSITSSSDLLG
                ..::::  * : :  :. .:  :
BoxShade v3.31 C (beta, 970507) Output
AT5G15830.1     M Q P N Y D S - - - - - - - - - - - - - S S L N N M Q Q Q D - - Y F N L N N Y Y N N L N P S T N N N N L N I L Q Y P - Q
pt019238_POPTR_    M Q P N E I A G L H Y L V P P N S S P Y S A H F S M T Q D N S Q M F Q F N Q F - - - T N Q S Y N - - - - - - F Q I P P Q
pt003451_POPTR_    M Q P S E V T G L H Y L V P S S P S P Y S A N F S M S Q N D S Q M F - - - Q F - - - T N P S Y N - - - - - - S Q I P S Q
 
AT5G15830.1     I Q E L N L Q S P V S N N S T T S D D A T E - E I F V I N E R K Q R R M V S N R E S A R R S R M R K Q R H L D E L L S Q
pt019238_POPTR_    L Q E F S L Q A S C M S S H S T S D E A D E Q Q L S L I N E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L W S Q
pt003451_POPTR_    V Q E F S L Q A S C M S S I S T S D E A D E Q Q L S L I N E R K Q R R M V S N R E S A R R S R M R K Q K H L D E L W S Q
 
AT5G15830.1     V A W L R S E N H Q L L D K L N Q V S D N N D L V I Q E N S S L K E E N L E L R Q V I T S M K K L G G G I H D K Y S S P
pt019238_POPTR_    V V W L R N E N H Q L V D K V N H V S E C H D Q V V Q E N N Q L K E E I S E L R Q V L T D M Q - - - - - L S S P Y P S L
pt003451_POPTR_    V V W F R N E N H Q L L D K L N H V S E C H D R V V H E N A Q L K E E T S G L R Q I L T D M Q - - - - - L N S P Y P L L
 
AT5G15830.1     S S M D E L D Q D F S S I T D D P R T H H P S - - - - - - -
pt019238_POPTR_    K G L E D I T C D T A Y L R A E S S N Q S I T S S S D L L G
pt003451_POPTR_    K D L E D I T C D T A Y L G S E S S N Q S I T S S S D L L G
 
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