fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035172 not found in 214aa AT3G30530.1 1st_not 0.421818181 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G15830.1     MQPNYDSSSLNNMQQQD---YFNLNNY---------------YNNLNPSTNNNNLNILQY
gm035172_Glyma1 MQTKEVVSSLSYLLPSNPCSYPPSNNYTSMIQNSIPTFQFQRFSNQIYGCNNSHNTTYQV
                **.:   ***. :  .:   *   ***               :.*   . **.: .  * 

AT5G15830.1     PQIQELNLQSPVSNNSTTSDDATEE-IFVINERKQRRMVSNRESARRSRMRKQRHLDELL
gm035172_Glyma1 P---DFSPQSSCISSNSTSDEADDQNLSLINERKHRRMLSNRESARRSRMRKQKHLDELW
                *   ::. **.  ...:***:* :: : :*****:***:**************:***** 

AT5G15830.1     SQVAWLRSENHQLLDKLNQVSDNNDLVIQENSSLKEENLELRQVITSMKKLGGGIHDKYS
gm035172_Glyma1 SQVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQ-----IHSPCG
                ***.***.*****:****:**:.:* *:****.****  ****:* .*:     **.  .

AT5G15830.1     SPSSMDELDQDFSSITDDPRTHHPS-----------------------
gm035172_Glyma1 GPNSF------ITPLEDHDVDHVPSAYLRSDDSSNQFNSCNNNMDLLG
                .*.*:      ::.: *.   * **
BoxShade v3.31 C (beta, 970507) Output
AT5G15830.1     M Q P N Y D S S S L N N M Q Q Q D - - - Y F N L N N Y - - - - - - - - - - - - - - - Y N N L N P S T N N N N L N I L Q Y
gm035172_Glyma1    M Q T K E V V S S L S Y L L P S N P C S Y P P S N N Y T S M I Q N S I P T F Q F Q R F S N Q I Y G C N N S H N T T Y Q V
 
AT5G15830.1     P Q I Q E L N L Q S P V S N N S T T S D D A T E E - I F V I N E R K Q R R M V S N R E S A R R S R M R K Q R H L D E L L
gm035172_Glyma1    P - - - D F S P Q S S C I S S N S T S D E A D D Q N L S L I N E R K H R R M L S N R E S A R R S R M R K Q K H L D E L W
 
AT5G15830.1     S Q V A W L R S E N H Q L L D K L N Q V S D N N D L V I Q E N S S L K E E N L E L R Q V I T S M K K L G G G I H D K Y S
gm035172_Glyma1    S Q V V W L R N E N H Q L I D K L N H V S E T H D Q V L Q E N S Q L K E E A S E L R Q M I R D M Q - - - - - I H S P C G
 
AT5G15830.1     S P S S M D E L D Q D F S S I T D D P R T H H P S - - - - - - - - - - - - - - - - - - - - - - -
gm035172_Glyma1    G P N S F - - - - - - I T P L E D H D V D H V P S A Y L R S D D S S N Q F N S C N N N M D L L G
 
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