fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035172 not found in 214aa AT3G30530.1 1st_not 0.421818181 II
Gm022507 not found in 193aa AT3G30530.1 not_not 0.418181818 III
Gm050542 not found in 195aa AT3G30530.1 not_not 0.418181818 III
Gm051143 not found in 220aa AT3G30530.1 not_not 0.410909090 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G15830.1     MQPNYDSSSLNNMQQQD---YFN-LNNY----YNNLNPS------TNN----NNLNILQY
gm022507_Glyma0 MQARE-ITGLNYLLPPDPC---F---NY-SMVQNTI-PTFQLHKLSNQFYGLQK---PPP
gm035172_Glyma1 MQTKEVVSSLSYLLPSNPCSYPP-SNNYTSMIQNSI-PTFQFQRFSNQIYGCNNSHNTTY
gm050542_Glyma1 MQARE-ITGLNYLLPSDPCPYPG---HY-SMVQNTI-PTFQLHKLSNQFYGLQN----PP
gm051143_Glyma1 MQSREVVSGLNYLLPSNPCPYPPNNNNYTTMFQNNINPTFQFQRFSNQIYGYNNINNTPY
                **..   :.*. :   :         :*     *.: *:      :*:    ::      

AT5G15830.1     PQIQE-LN-LQSPVSNNSTTSDDATEE-IFVINERKQRRMVSNRESARRSRMRKQRHLDE
gm022507_Glyma0 QVLAD-FSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDE
gm035172_Glyma1 -QVPD-FS-PQSSCISSNSTSDEADDQNLSLINERKHRRMLSNRESARRSRMRKQKHLDE
gm050542_Glyma1 KVLAD-FSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDE
gm051143_Glyma1 HKVPDLFS-PQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDE
                  : : :.  **.  ...:***:* ::   :*****:***:**************:****

AT5G15830.1     LLSQVAWLRSENHQLLDKLNQVSDNNDLVIQENSSLKEENLELRQVITSMKKLGGGIHDK
gm022507_Glyma0 LWSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQ-----LHSP
gm035172_Glyma1 LWSQVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQ-----IHSP
gm050542_Glyma1 LWSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQ-----LHSP
gm051143_Glyma1 LWSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIRDMQ-----IHSP
                * ***.***.*****:****:** .:* * *** .*:*:  ****:* .*:     :*. 

AT5G15830.1     YSSPSS-MDELDQ---DFSSI-------TDDPRTHHPS----------
gm022507_Glyma0 YHPPP--LSPIDD---DV-----SPYVKSDS------SITDSL-DLLG
gm035172_Glyma1 CGGPNSFITPLED--HDVDHV-PSAYLRSDDSSNQFNSCNNNM-DLLG
gm050542_Glyma1 YHPPP--LSPIDD---DV-----SPYVKSDS------SITDSL-DLLG
gm051143_Glyma1 C--PSSFITPLEDHHHDVDHVIPSAYLRSDSSNQLSNSCNNNMDDLLG
                   *   :  :::   *.          :*.      *
BoxShade v3.31 C (beta, 970507) Output
AT5G15830.1     M Q P N Y D S S S L N N M Q Q Q D - - - Y F N - L N N Y - - - - Y N N L N P S - - - - - - T N N - - - - N N L N I L Q Y
gm022507_Glyma0    M Q A R E - I T G L N Y L L P P D P C - - - F - - - N Y - S M V Q N T I - P T F Q L H K L S N Q F Y G L Q K - - - P P P
gm035172_Glyma1    M Q T K E V V S S L S Y L L P S N P C S Y P P - S N N Y T S M I Q N S I - P T F Q F Q R F S N Q I Y G C N N S H N T T Y
gm050542_Glyma1    M Q A R E - I T G L N Y L L P S D P C P Y P G - - - H Y - S M V Q N T I - P T F Q L H K L S N Q F Y G L Q N - - - - P P
gm051143_Glyma1    M Q S R E V V S G L N Y L L P S N P C P Y P P N N N N Y T T M F Q N N I N P T F Q F Q R F S N Q I Y G Y N N I N N T P Y
 
AT5G15830.1     P Q I Q E - L N - L Q S P V S N N S T T S D D A T E E - I F V I N E R K Q R R M V S N R E S A R R S R M R K Q R H L D E
gm022507_Glyma0    Q V L A D - F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E
gm035172_Glyma1    - Q V P D - F S - P Q S S C I S S N S T S D E A D D Q N L S L I N E R K H R R M L S N R E S A R R S R M R K Q K H L D E
gm050542_Glyma1    K V L A D - F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E
gm051143_Glyma1    H K V P D L F S - P Q S S C I S S N S T S D E A D E Q N L S L I N E R K H R R M I S N R E S A R R S R M R K Q K H L D E
 
AT5G15830.1     L L S Q V A W L R S E N H Q L L D K L N Q V S D N N D L V I Q E N S S L K E E N L E L R Q V I T S M K K L G G G I H D K
gm022507_Glyma0    L W S Q V V W L R N E N H Q L M D K L N H V S E S H D K V A Q E N V Q L R E E A S E L R Q M I C D M Q - - - - - L H S P
gm035172_Glyma1    L W S Q V V W L R N E N H Q L I D K L N H V S E T H D Q V L Q E N S Q L K E E A S E L R Q M I R D M Q - - - - - I H S P
gm050542_Glyma1    L W S Q V V W L R N E N H Q L M D K L N H V S A S Q D K V V Q E N V Q L R E E A S E L R Q M I C D M Q - - - - - L H S P
gm051143_Glyma1    L W S Q V V W L R N E N H Q L M D K L N H V S E S H D Q V M Q E N A Q L K E Q A L E L R Q M I R D M Q - - - - - I H S P
 
AT5G15830.1     Y S S P S S - M D E L D Q - - - D F S S I - - - - - - - T D D P R T H H P S - - - - - - - - - -
gm022507_Glyma0    Y H P P P - - L S P I D D - - - D V - - - - - S P Y V K S D S - - - - - - S I T D S L - D L L G
gm035172_Glyma1    C G G P N S F I T P L E D - - H D V D H V - P S A Y L R S D D S S N Q F N S C N N N M - D L L G
gm050542_Glyma1    Y H P P P - - L S P I D D - - - D V - - - - - S P Y V K S D S - - - - - - S I T D S L - D L L G
gm051143_Glyma1    C - - P S S F I T P L E D H H H D V D H V I P S A Y L R S D S S N Q L S N S C N N N M D D L L G
 
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