fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018826 not found in 369aa AT3G02380.1 1st_not 0.497023809 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G15840.1     MLKQESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRV
pt018826_POPTR_ MLKQESSG-GGGGDNRARVCDTCRAAPCTVYCRADSAYLCAGCDARVHAANRVASRHERV
                ******.. *.* :**** *****: .*****:******* .***:**:********:**

AT5G15840.1     RVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSS-MTTT
pt018826_POPTR_ SVCEACERAPAALLCKADAASLCTACDADIHSANPLARRHQRVPILPISGCLHGSPVGPA
                 ***:*******:**:** ********:::********************  ..* : .:

AT5G15840.1     HHQSEKTMTDPEKRLVVDQEEGEE--GDKDAKEVASWLFPNSDKNNNNQ-NNGLLFS---
pt018826_POPTR_ AGETEDRFT---------TQEGEETISEEEEDEAASWLLLNPVKNSKNQNNNGFLFGGEV
                  ::*. :*          :****  .::: .*.****: *. **.:** ***:**.   

AT5G15840.1     DEYLNLVDYNSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPLKLEESRGHQCHNQ-QNF
pt018826_POPTR_ DEYLDLVEYNSCTENQCSDQYNQ-QHYC-VPPKSYGGDRAVPIQYGEGKDHQQQRQYHNF
                ****:**:***. : : :.:*.* *: * ** .******.**::  *.:.** :.* :**

AT5G15840.1     QFNIKYGSSGTHYNDNGSINHNAYISSMETGVVPESTACVTTASHPRTPKGTVEQQPDPA
pt018826_POPTR_ QLGLEYEPSKAACSYNGSISQSVSMSSMDVGVVPESTMSEISISQHRPPKGTMELFSSTA
                *:.::* .* :  . ****.:.. :***:.******* .  : *: *.****:*  ...*

AT5G15840.1     SQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR-EIE
pt018826_POPTR_ IQM--PSQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRKDVE
                 **   :*****************:******************* ***::****** ::*

AT5G15840.1     AE-EQGFNTMLMYNTGYGIVPSF
pt018826_POPTR_ VEDDQMFSSTLMAETGYGIVPSF
                .* :* *.: ** :*********
BoxShade v3.31 C (beta, 970507) Output
AT5G15840.1     M L K Q E S N D I G S G E N N R A R P C D T C R S N A C T V Y C H A D S A Y L C M S C D A Q V H S A N R V A S R H K R V
pt018826_POPTR_    M L K Q E S S G - G G G G D N R A R V C D T C R A A P C T V Y C R A D S A Y L C A G C D A R V H A A N R V A S R H E R V
 
AT5G15840.1     R V C E S C E R A P A A F L C E A D D A S L C T A C D S E V H S A N P L A R R H Q R V P I L P I S G N S F S S - M T T T
pt018826_POPTR_    S V C E A C E R A P A A L L C K A D A A S L C T A C D A D I H S A N P L A R R H Q R V P I L P I S G C L H G S P V G P A
 
AT5G15840.1     H H Q S E K T M T D P E K R L V V D Q E E G E E - - G D K D A K E V A S W L F P N S D K N N N N Q - N N G L L F S - - -
pt018826_POPTR_    A G E T E D R F T - - - - - - - - - T Q E G E E T I S E E E E D E A A S W L L L N P V K N S K N Q N N N G F L F G G E V
 
AT5G15840.1     D E Y L N L V D Y N S S M D Y K F T G E Y S Q H Q Q N C S V P Q T S Y G G D R V V P L K L E E S R G H Q C H N Q - Q N F
pt018826_POPTR_    D E Y L D L V E Y N S C T E N Q C S D Q Y N Q - Q H Y C - V P P K S Y G G D R A V P I Q Y G E G K D H Q Q Q R Q Y H N F
 
AT5G15840.1     Q F N I K Y G S S G T H Y N D N G S I N H N A Y I S S M E T G V V P E S T A C V T T A S H P R T P K G T V E Q Q P D P A
pt018826_POPTR_    Q L G L E Y E P S K A A C S Y N G S I S Q S V S M S S M D V G V V P E S T M S E I S I S Q H R P P K G T M E L F S S T A
 
AT5G15840.1     S Q M I T V T Q L S P M D R E A R V L R Y R E K R K T R K F E K T I R Y A S R K A Y A E I R P R V N G R F A K R - E I E
pt018826_POPTR_    I Q M - - P S Q L S P M D R E A R V L R Y R E K K K T R K F E K T I R Y A S R K A Y A E T R P R I K G R F A K R K D V E
 
AT5G15840.1     A E - E Q G F N T M L M Y N T G Y G I V P S F
pt018826_POPTR_    V E D D Q M F S S T L M A E T G Y G I V P S F
 
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