fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035175 not found in 361aa AT3G02380.1 not_not 0.421130952 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G15840.1     MLKQESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRV
gm035175_Glyma1 MLKEGTNNVGGSTGTWSHVCDTCRSAPCVLYCHADSAYLCSSCDARVHAANRVASRHERV
                ***: :*::*.. .. :: ****** .*.:********** ****:**:********:**

AT5G15840.1     RVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTH
gm035175_Glyma1 WVCEACERAPAAFLCKADAASLCSSCDADIHSANPLASRHHRVPILPISGSLFG------
                 ***:**********:** ****::**:::******* **:*********. *.      

AT5G15840.1     HQSEKTMTDPEKRLV------VDQEEGEE---GDKDAKEVASWLFPNSDKNN----NNQN
gm035175_Glyma1 --------EPEHERVYAFVNEVEAEEEEEEVFDEYDEVEAASWLLPHPMKNDKIDENGGD
                        :**:. *      *: ** **   .: *  *.****:*:. **:    *. :

AT5G15840.1     NGLLFSDEYL-NLVDYNS--SMDYKFTGEYSQHQQNCS--VPQTSYGGDRVVPLKLEESR
gm035175_Glyma1 KGFLFGDEYFDNLVDCNSCGHNNNQFSNVYDQHQQNYSNTVPQ-NYA---VVPVQVP---
                :*:**.***: **** **    : :*:. *.***** *  *** .*.   ***:::    

AT5G15840.1     GHQCHNQQNFQFNIKYGSSGTHYNDNGSINHNAYISSMETGVVPESTACVTTASHPRTPK
gm035175_Glyma1 -------QHFQPGLDFDSSKAGFSYDGSLSQSVSVSSMDVGVVLESTISDISMSHSKSPI
                       *:** .:.:.** : :. :**:.:.. :***:.*** *** .  : **.::* 

AT5G15840.1     GTVEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVN
gm035175_Glyma1 GTTDLFP----PLPMPSHLTPMDREARVLRYREKKKTRKFEKKIRYASRKAYAETRPRIK
                **.:  *     :   ::*:**************:*******.*********** ***::

AT5G15840.1     GRFAKR-EIEAE-EQGFNTMLMYNTGYGIVPSF
gm035175_Glyma1 GRFAKRTDVEAEVDQMFSTTLFTEVGGSIFPTF
                ****** ::*** :* *.* *: :.* .*.*:*
BoxShade v3.31 C (beta, 970507) Output
AT5G15840.1     M L K Q E S N D I G S G E N N R A R P C D T C R S N A C T V Y C H A D S A Y L C M S C D A Q V H S A N R V A S R H K R V
gm035175_Glyma1    M L K E G T N N V G G S T G T W S H V C D T C R S A P C V L Y C H A D S A Y L C S S C D A R V H A A N R V A S R H E R V
 
AT5G15840.1     R V C E S C E R A P A A F L C E A D D A S L C T A C D S E V H S A N P L A R R H Q R V P I L P I S G N S F S S M T T T H
gm035175_Glyma1    W V C E A C E R A P A A F L C K A D A A S L C S S C D A D I H S A N P L A S R H H R V P I L P I S G S L F G - - - - - -
 
AT5G15840.1     H Q S E K T M T D P E K R L V - - - - - - V D Q E E G E E - - - G D K D A K E V A S W L F P N S D K N N - - - - N N Q N
gm035175_Glyma1    - - - - - - - - E P E H E R V Y A F V N E V E A E E E E E E V F D E Y D E V E A A S W L L P H P M K N D K I D E N G G D
 
AT5G15840.1     N G L L F S D E Y L - N L V D Y N S - - S M D Y K F T G E Y S Q H Q Q N C S - - V P Q T S Y G G D R V V P L K L E E S R
gm035175_Glyma1    K G F L F G D E Y F D N L V D C N S C G H N N N Q F S N V Y D Q H Q Q N Y S N T V P Q - N Y A - - - V V P V Q V P - - -
 
AT5G15840.1     G H Q C H N Q Q N F Q F N I K Y G S S G T H Y N D N G S I N H N A Y I S S M E T G V V P E S T A C V T T A S H P R T P K
gm035175_Glyma1    - - - - - - - Q H F Q P G L D F D S S K A G F S Y D G S L S Q S V S V S S M D V G V V L E S T I S D I S M S H S K S P I
 
AT5G15840.1     G T V E Q Q P D P A S Q M I T V T Q L S P M D R E A R V L R Y R E K R K T R K F E K T I R Y A S R K A Y A E I R P R V N
gm035175_Glyma1    G T T D L F P - - - - P L P M P S H L T P M D R E A R V L R Y R E K K K T R K F E K K I R Y A S R K A Y A E T R P R I K
 
AT5G15840.1     G R F A K R - E I E A E - E Q G F N T M L M Y N T G Y G I V P S F
gm035175_Glyma1    G R F A K R T D V E A E V D Q M F S T T L F T E V G G S I F P T F
 
0