fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb034331 not found in 270aa AT3G02790.1 1st_not 0.683486238 II
Gm025954 not found in 105aa AT3G02790.1 1st_not 0.770642201 II
Pt015725 not found in 104aa AT3G02790.1 1st_not 0.766055045 II
Pp024916 not found in 105aa AT3G02790.1 1st_not 0.706422018 II
Sm012132 not found in 211aa AT3G02790.1 1st_not 0.637614678 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G16470.1     ----------------------------------MTGKAKPK-----------KHTAKEL
gm025954_Glyma0 ----------------------------------MTGKAKPK-----------KHTAKEI
pt015725_POPTR_ ----------------------------------MTGKAKPK-----------KHTAKEL
Sb034331_Sorbi1 -----------------------------------RGRRSRR-------STRRRRSPRRS
pp024916_Pp1s14 ----------------------------------MTGKAKPK-----------KHTAKEI
Sm012132_Selmo1 IHGQILVGDSLFFLQAMDASSFLMAPSHARLLFLLGGRLHPSVLVGNLLLLEWKLGVAGV
                                                    *:               :      

AT5G16470.1     QAKADAALTNRGGGKAGLADRTGKEKGGHAKYECPHC----KITVPDLKTMQIHHE----
gm025954_Glyma0 AAKVDAATTNRGGGKAGMKDRTGLEKGGHAKYECPHC----KVTAPDVKSMQIHHD----
pt015725_POPTR_ AAKLDAATTNRGGGKAGVADRTGQEKGGHAKYECPHC----KTTAPDLKSMQIHHD----
Sb034331_Sorbi1 TRRRRTVAAARPGRRTGWGRTRAGTRSWRARSAAPR-----RPTSSPCRSTTRRAT----
pp024916_Pp1s14 QAKIDAATTNRGGGKAGVVDRKGLDKGGHAKLACPVC----KATAPDMKSMQIHHD----
Sm012132_Selmo1 VVDLHALDIRRGG----LADWA--HELGMAALVRPQSVLEPRLSASSVGGGRVHLGRDLL
                     :    * *            .   *    *      : : .       :      

AT5G16470.1     ---------SKHPK---------LTYEEPR-----------NLHEALAAPAESS------
gm025954_Glyma0 ---------ARHPK---------IPFEEDKV---------VNLH-ATTSVPESS------
pt015725_POPTR_ ---------ARHPK---------IPFEEDKL---------VNRH-A-SSAADSS------
Sb034331_Sorbi1 ---------PSSPSSRRSSSTCTPPPQPPPPPPPPPRPPPPSPSPASAAASRSSLLSCLP
pp024916_Pp1s14 ---------AKHPK---------LPWEEDKL---------INLH-ASTSVAAEE------
Sm012132_Selmo1 GRVLLGLGLASHPRL---DSTCGLPINPIK-----------SFAILYRSQARDT------
                         .  *           . :              .      : . .       

AT5G16470.1     --------KPKPGIRGSLKK----------------------------------------
gm025954_Glyma0 --------KPRPGVRGSLKK----------------------------------------
pt015725_POPTR_ --------KSRPGVRGSLKK----------------------------------------
Sb034331_Sorbi1 AWGNSLRFQSHPSTRSIINQTTDLWTLVRWPLPQSACGVLLVYCCFSLLYCWYMCYVIYV
pp024916_Pp1s14 --------KPKPGVRGSLKK----------------------------------------
Sm012132_Selmo1 --------RD--------------------------------------------------
                        :                                                   

AT5G16470.1     ---
gm025954_Glyma0 ---
pt015725_POPTR_ ---
Sb034331_Sorbi1 STI
pp024916_Pp1s14 ---
Sm012132_Selmo1 ---
BoxShade v3.31 C (beta, 970507) Output
AT5G16470.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T G K A K P K - - - - - - - - - - - K H T A K E L
gm025954_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T G K A K P K - - - - - - - - - - - K H T A K E I
pt015725_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T G K A K P K - - - - - - - - - - - K H T A K E L
Sb034331_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R G R R S R R - - - - - - - S T R R R R S P R R S
pp024916_Pp1s14    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T G K A K P K - - - - - - - - - - - K H T A K E I
Sm012132_Selmo1    I H G Q I L V G D S L F F L Q A M D A S S F L M A P S H A R L L F L L G G R L H P S V L V G N L L L L E W K L G V A G V
 
AT5G16470.1     Q A K A D A A L T N R G G G K A G L A D R T G K E K G G H A K Y E C P H C - - - - K I T V P D L K T M Q I H H E - - - -
gm025954_Glyma0    A A K V D A A T T N R G G G K A G M K D R T G L E K G G H A K Y E C P H C - - - - K V T A P D V K S M Q I H H D - - - -
pt015725_POPTR_    A A K L D A A T T N R G G G K A G V A D R T G Q E K G G H A K Y E C P H C - - - - K T T A P D L K S M Q I H H D - - - -
Sb034331_Sorbi1    T R R R R T V A A A R P G R R T G W G R T R A G T R S W R A R S A A P R - - - - - R P T S S P C R S T T R R A T - - - -
pp024916_Pp1s14    Q A K I D A A T T N R G G G K A G V V D R K G L D K G G H A K L A C P V C - - - - K A T A P D M K S M Q I H H D - - - -
Sm012132_Selmo1    V V D L H A L D I R R G G - - - - L A D W A - - H E L G M A A L V R P Q S V L E P R L S A S S V G G G R V H L G R D L L
 
AT5G16470.1     - - - - - - - - - S K H P K - - - - - - - - - L T Y E E P R - - - - - - - - - - - N L H E A L A A P A E S S - - - - - -
gm025954_Glyma0    - - - - - - - - - A R H P K - - - - - - - - - I P F E E D K V - - - - - - - - - V N L H - A T T S V P E S S - - - - - -
pt015725_POPTR_    - - - - - - - - - A R H P K - - - - - - - - - I P F E E D K L - - - - - - - - - V N R H - A - S S A A D S S - - - - - -
Sb034331_Sorbi1    - - - - - - - - - P S S P S S R R S S S T C T P P P Q P P P P P P P P P R P P P P S P S P A S A A A S R S S L L S C L P
pp024916_Pp1s14    - - - - - - - - - A K H P K - - - - - - - - - L P W E E D K L - - - - - - - - - I N L H - A S T S V A A E E - - - - - -
Sm012132_Selmo1    G R V L L G L G L A S H P R L - - - D S T C G L P I N P I K - - - - - - - - - - - S F A I L Y R S Q A R D T - - - - - -
 
AT5G16470.1     - - - - - - - - K P K P G I R G S L K K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm025954_Glyma0    - - - - - - - - K P R P G V R G S L K K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt015725_POPTR_    - - - - - - - - K S R P G V R G S L K K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb034331_Sorbi1    A W G N S L R F Q S H P S T R S I I N Q T T D L W T L V R W P L P Q S A C G V L L V Y C C F S L L Y C W Y M C Y V I Y V
pp024916_Pp1s14    - - - - - - - - K P K P G V R G S L K K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sm012132_Selmo1    - - - - - - - - R D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G16470.1     - - -
gm025954_Glyma0    - - -
pt015725_POPTR_    - - -
Sb034331_Sorbi1    S T I
pp024916_Pp1s14    - - -
Sm012132_Selmo1    - - -
 
0