fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050237 not found in 104aa AT3G02790.1 not_not 0.747706422 III
Pt013060 not found in 104aa AT3G02790.1 not_not 0.761467889 III
Pt013059 not found in 114aa AT3G02790.1 not_not 0.752293577 III
Pp008946 not found in 104aa AT3G02790.1 not_not 0.674311926 III
Pp028557 not found in 104aa AT3G02790.1 not_not 0.651376146 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G16470.1     MTGKAKPKKHTAKELQAKADAALTNRGGGKAGLADRTGKEKGGHAKYECPHCKITVPDLK
pt013059_POPTR_ MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRTGQEKGGHAKYECPHCKITAPDLK
gm050237_Glyma1 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGLKDRSGLEKGGHAKYECPHCKVTAPDVK
pp028557_Pp1s21 MTGKAKPKKHTAKEIAMKIDMATTNRGGGKAGVIDRKALDKGGHAKLACPICKATAPDVK
pp008946_Pp1s90 MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGVVDRKALDKGGHAKLACPICKATAPDVK
pt013060_POPTR_ MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRTGQEKGGHAKYECPHCKITAPDLK
                **************:  * * * *********  **.. :******  ** ** *.**:*

AT5G16470.1     TMQIHHESKHPKLTYEEPR--NLHEALAAPAESSKPKPGIRGSLKK----------
pt013059_POPTR_ TMQIHHDARHPKLPFEEDKLSNLHA--VHVADSSKPRPGVKGSHKNNFGEGSSKSS
gm050237_Glyma1 SMQIHHDARHPKIPFEEDKVVNLHA--THVPESSKPRPGVRGSLKK----------
pp028557_Pp1s21 SMSIHHEAKHPKLPWEEDKLINLHA--TASTAEDKPKPGVRGSLKK----------
pp008946_Pp1s90 SMSIHHEAKHPKLPWEEDKLINLHA--TASTAEDKPKPGVRGSLKK----------
pt013060_POPTR_ TMQIHHDARHPKLPFEEDKLSNLHA--VHVADSSKPRPGVKGSHKK----------
                :*.***:::***:.:** :  ***   .  . ..**:**::** *:
BoxShade v3.31 C (beta, 970507) Output
AT5G16470.1     M T G K A K P K K H T A K E L Q A K A D A A L T N R G G G K A G L A D R T G K E K G G H A K Y E C P H C K I T V P D L K
pt013059_POPTR_    M T G K A K P K K H T A K E I A A K V D A A T T N R G G G K A G Q A D R T G Q E K G G H A K Y E C P H C K I T A P D L K
gm050237_Glyma1    M T G K A K P K K H T A K E I A A K V D A A T T N R G G G K A G L K D R S G L E K G G H A K Y E C P H C K V T A P D V K
pp028557_Pp1s21    M T G K A K P K K H T A K E I A M K I D M A T T N R G G G K A G V I D R K A L D K G G H A K L A C P I C K A T A P D V K
pp008946_Pp1s90    M T G K A K P K K H T A K E I A A K I D A A T T N R G G G K A G V V D R K A L D K G G H A K L A C P I C K A T A P D V K
pt013060_POPTR_    M T G K A K P K K H T A K E I A A K V D A A T T N R G G G K A G Q A D R T G Q E K G G H A K Y E C P H C K I T A P D L K
 
AT5G16470.1     T M Q I H H E S K H P K L T Y E E P R - - N L H E A L A A P A E S S K P K P G I R G S L K K - - - - - - - - - -
pt013059_POPTR_    T M Q I H H D A R H P K L P F E E D K L S N L H A - - V H V A D S S K P R P G V K G S H K N N F G E G S S K S S
gm050237_Glyma1    S M Q I H H D A R H P K I P F E E D K V V N L H A - - T H V P E S S K P R P G V R G S L K K - - - - - - - - - -
pp028557_Pp1s21    S M S I H H E A K H P K L P W E E D K L I N L H A - - T A S T A E D K P K P G V R G S L K K - - - - - - - - - -
pp008946_Pp1s90    S M S I H H E A K H P K L P W E E D K L I N L H A - - T A S T A E D K P K P G V R G S L K K - - - - - - - - - -
pt013060_POPTR_    T M Q I H H D A R H P K L P F E E D K L S N L H A - - V H V A D S S K P R P G V K G S H K K - - - - - - - - - -
 
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