Input
| Putative repression domain
|
|
AT5G16470.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm025954 |
not found in 105aa |
AT3G02790.1 |
1st_not |
0.770642201 |
II |
Gm050237 |
not found in 104aa |
AT3G02790.1 |
not_not |
0.747706422 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT5G16470.1 MTGKAKPKKHTAKELQAKADAALTNRGGGKAGLADRTGKEKGGHAKYECPHCKITVPDLK
gm050237_Glyma1 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGLKDRSGLEKGGHAKYECPHCKVTAPDVK
gm025954_Glyma0 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGMKDRTGLEKGGHAKYECPHCKVTAPDVK
**************: **.*** *********: **:* **************:*.**:*
AT5G16470.1 TMQIHHESKHPKLTYEEPR--NLHEALAAPAESSKPKPGIRGSLKK
gm050237_Glyma1 SMQIHHDARHPKIPFEEDKVVNLHA-THVP-ESSKPRPGVRGSLKK
gm025954_Glyma0 SMQIHHDARHPKIPFEEDKVVNLHATTSVP-ESSKPRPGVRGSLKK
:*****:::***:.:** : *** .* *****:**:******
BoxShade v3.31 C (beta, 970507) Output
AT5G16470.1 |
M |
T |
G |
K |
A |
K |
P |
K |
K |
H |
T |
A |
K |
E |
L |
Q |
A |
K |
A |
D |
A |
A |
L |
T |
N |
R |
G |
G |
G |
K |
A |
G |
L |
A |
D |
R |
T |
G |
K |
E |
K |
G |
G |
H |
A |
K |
Y |
E |
C |
P |
H |
C |
K |
I |
T |
V |
P |
D |
L |
K |
gm050237_Glyma1 |
M |
T |
G |
K |
A |
K |
P |
K |
K |
H |
T |
A |
K |
E |
I |
A |
A |
K |
V |
D |
A |
A |
T |
T |
N |
R |
G |
G |
G |
K |
A |
G |
L |
K |
D |
R |
S |
G |
L |
E |
K |
G |
G |
H |
A |
K |
Y |
E |
C |
P |
H |
C |
K |
V |
T |
A |
P |
D |
V |
K |
gm025954_Glyma0 |
M |
T |
G |
K |
A |
K |
P |
K |
K |
H |
T |
A |
K |
E |
I |
A |
A |
K |
V |
D |
A |
A |
T |
T |
N |
R |
G |
G |
G |
K |
A |
G |
M |
K |
D |
R |
T |
G |
L |
E |
K |
G |
G |
H |
A |
K |
Y |
E |
C |
P |
H |
C |
K |
V |
T |
A |
P |
D |
V |
K |
|
AT5G16470.1 |
T |
M |
Q |
I |
H |
H |
E |
S |
K |
H |
P |
K |
L |
T |
Y |
E |
E |
P |
R |
- |
- |
N |
L |
H |
E |
A |
L |
A |
A |
P |
A |
E |
S |
S |
K |
P |
K |
P |
G |
I |
R |
G |
S |
L |
K |
K |
gm050237_Glyma1 |
S |
M |
Q |
I |
H |
H |
D |
A |
R |
H |
P |
K |
I |
P |
F |
E |
E |
D |
K |
V |
V |
N |
L |
H |
A |
- |
T |
H |
V |
P |
- |
E |
S |
S |
K |
P |
R |
P |
G |
V |
R |
G |
S |
L |
K |
K |
gm025954_Glyma0 |
S |
M |
Q |
I |
H |
H |
D |
A |
R |
H |
P |
K |
I |
P |
F |
E |
E |
D |
K |
V |
V |
N |
L |
H |
A |
T |
T |
S |
V |
P |
- |
E |
S |
S |
K |
P |
R |
P |
G |
V |
R |
G |
S |
L |
K |
K |
|
|