fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os005328 not found in 439aa AT3G02830.1 1st_not 0.517006802 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G16540.1     MDFDSISRES------------TFLSPL----------------------------LNQN
Os005328_Os01t0 --MDDAGRASAPAVVTVTASAAAPTPPLPPPPPPPPPSQLPATAAATDEPSHDPAALYGE
                  :*. .* *            :  .**                            *  :

AT5G16540.1     AMW-QMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATAR
Os005328_Os01t0 GMWQQMTMSGSGAMQ-PGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASAR
                .** **.:....:*   *.**** *****:**:******** :******:**:*.**:**

AT5G16540.1     IKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDC
Os005328_Os01t0 MKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKEC
                :*******:*****::********** ********:**** * *.:*.*.*****.*.:*

AT5G16540.1     SYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQ-SLTGQPSY-----SWS--
Os005328_Os01t0 AYYLKTGQCKYGNTCKFHHPEL--FNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAFP
                :*:*: ****:*.****:**:    * *.* ****:*.::: * *. *.*     **:  

AT5G16540.1     RTSFVANPPRLQDPSGFA------------------------SGSQGGLFSSGFH-----
Os005328_Os01t0 RGSFIPS-PRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGT
                * **:.. ** *:**.:*                        *.*:. * *.* :     

AT5G16540.1     -------SGN----------SVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCK
Os005328_Os01t0 SQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCK
                       :**          * *:  *** *********.*****:**********:***

AT5G16540.1     FHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDH-----PMRVFT
Os005328_Os01t0 FHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPMGVYA
                ***** *. *.******.********* ** ***********..*****     ** *::

AT5G16540.1     YNN-NTASPSPSSSLHQETAITTELRNLLVSSSVEAKPTSLPETTSAKDTIVDAQH
Os005328_Os01t0 YGSASTNVPM--------------VRRLLQSPSASAYTS-----------------
                *.. .*  *               :*.** *.*..* .:
BoxShade v3.31 C (beta, 970507) Output
AT5G16540.1     M D F D S I S R E S - - - - - - - - - - - - T F L S P L - - - - - - - - - - - - - - - - - - - - - - - - - - - - L N Q N
Os005328_Os01t0    - - M D D A G R A S A P A V V T V T A S A A A P T P P L P P P P P P P P P S Q L P A T A A A T D E P S H D P A A L Y G E
 
AT5G16540.1     A M W - Q M N L G S D D T M G V D G S Y P E R H G E P D C A Y Y I R T G L C R F G S T C R F N H P H D R K L V I A T A R
Os005328_Os01t0    G M W Q Q M T M S G S G A M Q - P G P Y P E R S G E P D C T Y Y L R T G L C R F G M S C R F N H P Q D R N L A I A S A R
 
AT5G16540.1     I K G E Y P E R I G Q P E C E F Y L K T G T C K F G V T C K F H H P R N K A G I D G S V S V N V L S Y P L R P N E D D C
Os005328_Os01t0    M K G E Y P E R M G Q P E C Q Y Y L K T G T C K F G P T C K F H H P R E K A G I A G R V Q L N T L G Y P L R P S E K E C
 
AT5G16540.1     S Y F L R I G Q C K F G G T C K F N H P Q T Q S T N L M V S V R G S P V Y S A L Q - S L T G Q P S Y - - - - - S W S - -
Os005328_Os01t0    A Y Y L K T G Q C K Y G N T C K F H H P E L - - F N A M A S S R G S P I Y P S V H S S A T A G P P Y T G T M A S W A F P
 
AT5G16540.1     R T S F V A N P P R L Q D P S G F A - - - - - - - - - - - - - - - - - - - - - - - - S G S Q G G L F S S G F H - - - - -
Os005328_Os01t0    R G S F I P S - P R W Q N P S N Y A P M I V P Q G L V Q V P S W N S Y T G Q M M P V S S S E S R L Q S P G A Q Q T Y G T
 
AT5G16540.1     - - - - - - - S G N - - - - - - - - - - S V P L G F Y A L P R E N V F P E R P G Q P E C Q F Y M K T G D C K F G T V C K
Os005328_Os01t0    S Q Q V D A S A G N Q G M L S P Y R S S S Y P V P Q Y A L Q R E N V F P E R P D Q P E C Q Y Y M K T G D C K F G A V C K
 
AT5G16540.1     F H H P R D R Q T P P P D C V L S S V G L P L R P G E P L C V F Y S R Y G I C K F G P S C K F D H - - - - - P M R V F T
Os005328_Os01t0    F H H P R V R S M P T P D C V L S P V G L P L R P G E E L C K F Y S R Y G I C K F G A N C K F D H P T M A P P M G V Y A
 
AT5G16540.1     Y N N - N T A S P S P S S S L H Q E T A I T T E L R N L L V S S S V E A K P T S L P E T T S A K D T I V D A Q H
Os005328_Os01t0    Y G S A S T N V P M - - - - - - - - - - - - - - V R R L L Q S P S A S A Y T S - - - - - - - - - - - - - - - - -
 
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