fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os005329 not found in 322aa AT3G02830.1 not_not 0.408163265 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G16540.1     MDFDSISRESTFLSPLLNQNAMWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFG
Os005329_Os01t0 ------------------------------------------------------------
                                                                            

AT5G16540.1     STCRFNHPHDRKLVIATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGID
Os005329_Os01t0 -------------------MKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIA
                                   :*******:*****::********** ********:**** 

AT5G16540.1     GSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQ
Os005329_Os01t0 GRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPEL--FNAMASSRGSPIYPSVH
                * *.:*.*.*****.*.:*:*:*: ****:*.****:**:    * *.* ****:*.:::

AT5G16540.1     -SLTGQPSY-----SWS--RTSFVANPPRLQDPSGFA-----------------------
Os005329_Os01t0 SSATAGPPYTGTMASWAFPRGSFIPS-PRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMP
                 * *. *.*     **:  * **:.. ** *:**.:*                       

AT5G16540.1     -SGSQGGLFSSGFH------------SGN----------SVPLGFYALPRENVFPERPGQ
Os005329_Os01t0 VSSSESRLQSPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQ
                 *.*:. * *.* :            :**          * *:  *** *********.*

AT5G16540.1     PECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKF
Os005329_Os01t0 PECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKF
                ****:**********:******** *. *.******.********* ** **********

AT5G16540.1     GPSCKFDH-----PMRVFTYNN-NTASPSPSSSLHQETAITTELRNLLVSSSVEAKPTSL
Os005329_Os01t0 GANCKFDHPTMAPPMGVYAYGSASTNVPM--------------VRRLLQSPSASAYTS--
                *..*****     ** *::*.. .*  *               :*.** *.*..* .:  

AT5G16540.1     PETTSAKDTIVDAQH
Os005329_Os01t0 ---------------
BoxShade v3.31 C (beta, 970507) Output
AT5G16540.1     M D F D S I S R E S T F L S P L L N Q N A M W Q M N L G S D D T M G V D G S Y P E R H G E P D C A Y Y I R T G L C R F G
Os005329_Os01t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G16540.1     S T C R F N H P H D R K L V I A T A R I K G E Y P E R I G Q P E C E F Y L K T G T C K F G V T C K F H H P R N K A G I D
Os005329_Os01t0    - - - - - - - - - - - - - - - - - - - M K G E Y P E R M G Q P E C Q Y Y L K T G T C K F G P T C K F H H P R E K A G I A
 
AT5G16540.1     G S V S V N V L S Y P L R P N E D D C S Y F L R I G Q C K F G G T C K F N H P Q T Q S T N L M V S V R G S P V Y S A L Q
Os005329_Os01t0    G R V Q L N T L G Y P L R P S E K E C A Y Y L K T G Q C K Y G N T C K F H H P E L - - F N A M A S S R G S P I Y P S V H
 
AT5G16540.1     - S L T G Q P S Y - - - - - S W S - - R T S F V A N P P R L Q D P S G F A - - - - - - - - - - - - - - - - - - - - - - -
Os005329_Os01t0    S S A T A G P P Y T G T M A S W A F P R G S F I P S - P R W Q N P S N Y A P M I V P Q G L V Q V P S W N S Y T G Q M M P
 
AT5G16540.1     - S G S Q G G L F S S G F H - - - - - - - - - - - - S G N - - - - - - - - - - S V P L G F Y A L P R E N V F P E R P G Q
Os005329_Os01t0    V S S S E S R L Q S P G A Q Q T Y G T S Q Q V D A S A G N Q G M L S P Y R S S S Y P V P Q Y A L Q R E N V F P E R P D Q
 
AT5G16540.1     P E C Q F Y M K T G D C K F G T V C K F H H P R D R Q T P P P D C V L S S V G L P L R P G E P L C V F Y S R Y G I C K F
Os005329_Os01t0    P E C Q Y Y M K T G D C K F G A V C K F H H P R V R S M P T P D C V L S P V G L P L R P G E E L C K F Y S R Y G I C K F
 
AT5G16540.1     G P S C K F D H - - - - - P M R V F T Y N N - N T A S P S P S S S L H Q E T A I T T E L R N L L V S S S V E A K P T S L
Os005329_Os01t0    G A N C K F D H P T M A P P M G V Y A Y G S A S T N V P M - - - - - - - - - - - - - - V R R L L Q S P S A S A Y T S - -
 
AT5G16540.1     P E T T S A K D T I V D A Q H
Os005329_Os01t0    - - - - - - - - - - - - - - -
 
0