fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050231 not found in 426aa AT3G02830.1 1st_not 0.567346938 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G16540.1     MDFDS---ISRESTFLSPLLNQNAMWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLC
gm050231_Glyma1 MEFDAAIPVSREH------LPQGAMWQINLRSSETMESE-PYPEHPGEPDCSYYIRTGLC
                *:**:   :***       * *.****:** *.:**  : .***: *****:********

AT5G16540.1     RFGSTCRFNHPHDRKLVIATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKA
gm050231_Glyma1 RFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQDYLKTGTCKFGATCRFHHPRDKA
                ***:******* :***.**:**:***:*********: **********.**:*****:**

AT5G16540.1     GIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYS
gm050231_Glyma1 GIAGRVALNILGYPLRPDEPECGYYLRTGQCKFGNTCKFHHP--QPNNMVLSMRSSPVYP
                ** * *::*:*.*****:* :*.*:** ******.****:**  *..*:::*:*.****.

AT5G16540.1     ALQSLT--GQPSYS-----WSRTSFVANPPRLQDPSGFA---------------------
gm050231_Glyma1 TVHSPTTPGHQSYATGITNWSSSSYIPS-PRWQGPSSYAPLILPQGMVSVSGWSAYSGQM
                :::* *  *: **:     ** :*::.. ** *.**.:*                     

AT5G16540.1     -------------------------SGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERP
gm050231_Glyma1 GSDSPQQTMANGQSYGTSRQSEPANSGSQGAY--SQFRSG-SVPVGFYALQRENIFPERP
                                         *****.   * *:** ***:***** ***:*****

AT5G16540.1     GQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGIC
gm050231_Glyma1 DQPECQFYMKTGDCKFGAVCRFHHPHERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGIC
                .****************:**:****::*  *.******.:********************

AT5G16540.1     KFGPSCKFDHPMRVFTYNNNTASP---SPSSSLHQETAITTEL----RNLLVSSSVEAKP
gm050231_Glyma1 KFGPSCKFDHPMGVFTY-NMSASPLADAPGRRMLGSSSGTSALNLSSEGLVESGSANPRR
                ************ **** * :***   :*.  :  .:: *: *    ..*: *.*.:.: 

AT5G16540.1     TSLPETTS--AKDTIVDAQH
gm050231_Glyma1 LSLSETRQIPSGDDNIDEEG
                 **.** .  : *  :* :
BoxShade v3.31 C (beta, 970507) Output
AT5G16540.1     M D F D S - - - I S R E S T F L S P L L N Q N A M W Q M N L G S D D T M G V D G S Y P E R H G E P D C A Y Y I R T G L C
gm050231_Glyma1    M E F D A A I P V S R E H - - - - - - L P Q G A M W Q I N L R S S E T M E S E - P Y P E H P G E P D C S Y Y I R T G L C
 
AT5G16540.1     R F G S T C R F N H P H D R K L V I A T A R I K G E Y P E R I G Q P E C E F Y L K T G T C K F G V T C K F H H P R N K A
gm050231_Glyma1    R F G A T C R F N H P P N R K L A I A A A R M K G E F P E R I G Q P E C Q D Y L K T G T C K F G A T C R F H H P R D K A
 
AT5G16540.1     G I D G S V S V N V L S Y P L R P N E D D C S Y F L R I G Q C K F G G T C K F N H P Q T Q S T N L M V S V R G S P V Y S
gm050231_Glyma1    G I A G R V A L N I L G Y P L R P D E P E C G Y Y L R T G Q C K F G N T C K F H H P - - Q P N N M V L S M R S S P V Y P
 
AT5G16540.1     A L Q S L T - - G Q P S Y S - - - - - W S R T S F V A N P P R L Q D P S G F A - - - - - - - - - - - - - - - - - - - - -
gm050231_Glyma1    T V H S P T T P G H Q S Y A T G I T N W S S S S Y I P S - P R W Q G P S S Y A P L I L P Q G M V S V S G W S A Y S G Q M
 
AT5G16540.1     - - - - - - - - - - - - - - - - - - - - - - - - - S G S Q G G L F S S G F H S G N S V P L G F Y A L P R E N V F P E R P
gm050231_Glyma1    G S D S P Q Q T M A N G Q S Y G T S R Q S E P A N S G S Q G A Y - - S Q F R S G - S V P V G F Y A L Q R E N I F P E R P
 
AT5G16540.1     G Q P E C Q F Y M K T G D C K F G T V C K F H H P R D R Q T P P P D C V L S S V G L P L R P G E P L C V F Y S R Y G I C
gm050231_Glyma1    D Q P E C Q F Y M K T G D C K F G A V C R F H H P H E R M I P A P D C V L S P I G L P L R P G E P L C V F Y S R Y G I C
 
AT5G16540.1     K F G P S C K F D H P M R V F T Y N N N T A S P - - - S P S S S L H Q E T A I T T E L - - - - R N L L V S S S V E A K P
gm050231_Glyma1    K F G P S C K F D H P M G V F T Y - N M S A S P L A D A P G R R M L G S S S G T S A L N L S S E G L V E S G S A N P R R
 
AT5G16540.1     T S L P E T T S - - A K D T I V D A Q H
gm050231_Glyma1    L S L S E T R Q I P S G D D N I D E E G
 
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