fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16560.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp000710 not found in 485aa AT5G16560.1 1st_1st 0.193181818 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G16560.1     MSMEGVFLEK----TKTNTTTTLPDLSLHISLPDIHQYHHNESSKESSRRSSQLENNNRS
pp000710_Pp1s11 --MQELSPDKSMSVSSSSNTHSGPDLALHISPP---------SSSSCDRR---LKSSSQY
                  *: :  :*    :.:..* : ***:**** *         **....**   *:...: 

AT5G16560.1     SNFELSLSH-HN------------------------------------------------
pp000710_Pp1s11 SNLQVVPDHVHGFDLWKQPTKSMSCITDSESNVSSPAAEGYSPAYVNSMGASTVLCLANP
                **:::  .* *.                                                

AT5G16560.1     -------------------------------------------HP--------TARIFHC
pp000710_Pp1s11 PLDSQYVKRALPKSTADEGMVIGRREEVQESVQENGYICKGLAHPFLLDNWSESIRI--S
                                                           **        : **  .

AT5G16560.1     PDR-------------RTLNLPHQQHYNNPIINGVHQRVDESEISNLHRPIRGIPVYHNR
pp000710_Pp1s11 PDRVSSPSDRIRKDLPRTFSI-----YPNETQENFTRRLSESSIDDLYS--------QQR
                ***             **:.:     * *   :.. :*:.**.*.:*:         ::*

AT5G16560.1     SFPFHQQNSSLPSLGGGDMDQISILN-SSSGYNNAYRSLQSSPRLK-----GVPLHHHHH
pp000710_Pp1s11 VFSRPNYTSSHPS----PIHELSLGRWSDPGVHPEALPSRDLPKFQNYYMVGMDSCHRFS
                 *.  : .** **     :.::*: . *..* :    . :. *:::     *:   *:. 

AT5G16560.1     HNQYGV------VGSSDSSSPHH-----------HNHHHHGM------IRSRFLPKMPTK
pp000710_Pp1s11 H-QYGLENGKNMLGMQASTCGGNLSTLLGNYGAGYNAKREGVYANVTSFRSHFPPRSPAK
                * ***:      :* . *:.  :           :* ::.*:      :**:* *: *:*

AT5G16560.1     RSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTV
pp000710_Pp1s11 RSIRAPRMRWTSTLHAHFVQAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTV
                **:*********:***:**:********************:*******************

AT5G16560.1     KTTNK---PAASSDGSGEEEMGINGNEVHHQSSTDQRAQSDDTSLHQETDISSTQPRWSN
pp000710_Pp1s11 KTSDKSGPPSGSRDPSP-------------TSSLDSRLTTEELLMSDSMSQTGRSVHMSN
                **::*   *:.* * *               ** *.*  :::  : :. . :. . : **

AT5G16560.1     SSRETWPLSNNCSSDIDTMIRTSSTSMISHYQRSSIQNQEQRSNDQAKRC---GNLSCEN
pp000710_Pp1s11 STMHNLELGNYRS------LGDSQDATVSMQNRVWLPENPQNFNQAQRGCWKFGTLSC--
                *: ..  *.*  *      :  *. : :*  :*  : :: *. *:  : *   *.***  

AT5G16560.1     PSLEFTLGRPDWHEK
pp000710_Pp1s11 ---------------
BoxShade v3.31 C (beta, 970507) Output
AT5G16560.1     M S M E G V F L E K - - - - T K T N T T T T L P D L S L H I S L P D I H Q Y H H N E S S K E S S R R S S Q L E N N N R S
pp000710_Pp1s11    - - M Q E L S P D K S M S V S S S S N T H S G P D L A L H I S P P - - - - - - - - - S S S S C D R R - - - L K S S S Q Y
 
AT5G16560.1     S N F E L S L S H - H N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp000710_Pp1s11    S N L Q V V P D H V H G F D L W K Q P T K S M S C I T D S E S N V S S P A A E G Y S P A Y V N S M G A S T V L C L A N P
 
AT5G16560.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H P - - - - - - - - T A R I F H C
pp000710_Pp1s11    P L D S Q Y V K R A L P K S T A D E G M V I G R R E E V Q E S V Q E N G Y I C K G L A H P F L L D N W S E S I R I - - S
 
AT5G16560.1     P D R - - - - - - - - - - - - - R T L N L P H Q Q H Y N N P I I N G V H Q R V D E S E I S N L H R P I R G I P V Y H N R
pp000710_Pp1s11    P D R V S S P S D R I R K D L P R T F S I - - - - - Y P N E T Q E N F T R R L S E S S I D D L Y S - - - - - - - - Q Q R
 
AT5G16560.1     S F P F H Q Q N S S L P S L G G G D M D Q I S I L N - S S S G Y N N A Y R S L Q S S P R L K - - - - - G V P L H H H H H
pp000710_Pp1s11    V F S R P N Y T S S H P S - - - - P I H E L S L G R W S D P G V H P E A L P S R D L P K F Q N Y Y M V G M D S C H R F S
 
AT5G16560.1     H N Q Y G V - - - - - - V G S S D S S S P H H - - - - - - - - - - - H N H H H H G M - - - - - - I R S R F L P K M P T K
pp000710_Pp1s11    H - Q Y G L E N G K N M L G M Q A S T C G G N L S T L L G N Y G A G Y N A K R E G V Y A N V T S F R S H F P P R S P A K
 
AT5G16560.1     R S M R A P R M R W T S S L H A R F V H A V E L L G G H E R A T P K S V L E L M D V K D L T L A H V K S H L Q M Y R T V
pp000710_Pp1s11    R S I R A P R M R W T S T L H A H F V Q A V E L L G G H E R A T P K S V L E L M N V K D L T L A H V K S H L Q M Y R T V
 
AT5G16560.1     K T T N K - - - P A A S S D G S G E E E M G I N G N E V H H Q S S T D Q R A Q S D D T S L H Q E T D I S S T Q P R W S N
pp000710_Pp1s11    K T S D K S G P P S G S R D P S P - - - - - - - - - - - - - T S S L D S R L T T E E L L M S D S M S Q T G R S V H M S N
 
AT5G16560.1     S S R E T W P L S N N C S S D I D T M I R T S S T S M I S H Y Q R S S I Q N Q E Q R S N D Q A K R C - - - G N L S C E N
pp000710_Pp1s11    S T M H N L E L G N Y R S - - - - - - L G D S Q D A T V S M Q N R V W L P E N P Q N F N Q A Q R G C W K F G T L S C - -
 
AT5G16560.1     P S L E F T L G R P D W H E K
pp000710_Pp1s11    - - - - - - - - - - - - - - -
 
0