fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020680 not found in 319aa AT5G16600.1 not_1st 0.558882235 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G16600.1     MGRQPCCDKVGLKKGPWTIEEDKKLINFILTNGHCCWRALPKLSGLLRCGKSCRLRWINY
pt020680_POPTR_ MGRQPCCDKVGLKKGPWTSDEDKKLINFILANGQCCWRAVPKLAGLLRCGKSCRLRWTNY
                ****************** :**********:**:*****:***:************* **

AT5G16600.1     LRPDLKRGLLSEYEEQKVINLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
pt020680_POPTR_ LRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
                ***************: **:****************************************

AT5G16600.1     IDPLTHKPLSEQEA------SQQAQGRKKSLVPHDDKNPKQDQQTKDEQE---QHQLEQA
pt020680_POPTR_ IDPLTHKPLSAIETPPPPPPPQQEVQVQNSIQELEQQAGRQSSSTNDISELGQNNEPETS
                **********  *:      .**    ::*:   :::  :*...*:* .*   ::: * :

AT5G16600.1     L-------EKNNTSVSGD------GFCIDEVPLLNPHEILIDISSSHHHHSNDDNVNINT
pt020680_POPTR_ LQSARTQDEENNIGSTYDTMERMNGFCTDEVPLIEPHEMLVPGGPSPSSTS--------T
                *       *:** . : *      *** *****::***:*:  ..*    *        *

AT5G16600.1     SKFTSPSSSSSSTSSCISSVVPGDEFSKFFDEMEILDLKWLSSDDSLGDDISKDGKFNNS
pt020680_POPTR_ SSLTSASSSSSSSSYGSNNIL---------DELLLPDFEW---------------PLNN-
                *.:**.******:*   ..::         **: : *::*                :** 

AT5G16600.1     TVDTMNLWDINDLSSLDMFMNEHDDG---------FIGNGNGCSRMVLDQDSWTFDLL
pt020680_POPTR_ -VD-IGLWD-DDLSSWDLLISDVDSGRKQATMFDPFL---NQCPRTVLDQDYWTYGLM
                 ** :.*** :**** *:::.: *.*         *:   * *.* ***** **:.*:
BoxShade v3.31 C (beta, 970507) Output
AT5G16600.1     M G R Q P C C D K V G L K K G P W T I E E D K K L I N F I L T N G H C C W R A L P K L S G L L R C G K S C R L R W I N Y
pt020680_POPTR_    M G R Q P C C D K V G L K K G P W T S D E D K K L I N F I L A N G Q C C W R A V P K L A G L L R C G K S C R L R W T N Y
 
AT5G16600.1     L R P D L K R G L L S E Y E E Q K V I N L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
pt020680_POPTR_    L R P D L K R G L L S E Y E E K M V I D L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
 
AT5G16600.1     I D P L T H K P L S E Q E A - - - - - - S Q Q A Q G R K K S L V P H D D K N P K Q D Q Q T K D E Q E - - - Q H Q L E Q A
pt020680_POPTR_    I D P L T H K P L S A I E T P P P P P P P Q Q E V Q V Q N S I Q E L E Q Q A G R Q S S S T N D I S E L G Q N N E P E T S
 
AT5G16600.1     L - - - - - - - E K N N T S V S G D - - - - - - G F C I D E V P L L N P H E I L I D I S S S H H H H S N D D N V N I N T
pt020680_POPTR_    L Q S A R T Q D E E N N I G S T Y D T M E R M N G F C T D E V P L I E P H E M L V P G G P S P S S T S - - - - - - - - T
 
AT5G16600.1     S K F T S P S S S S S S T S S C I S S V V P G D E F S K F F D E M E I L D L K W L S S D D S L G D D I S K D G K F N N S
pt020680_POPTR_    S S L T S A S S S S S S S S Y G S N N I L - - - - - - - - - D E L L L P D F E W - - - - - - - - - - - - - - - P L N N -
 
AT5G16600.1     T V D T M N L W D I N D L S S L D M F M N E H D D G - - - - - - - - - F I G N G N G C S R M V L D Q D S W T F D L L
pt020680_POPTR_    - V D - I G L W D - D D L S S W D L L I S D V D S G R K Q A T M F D P F L - - - N Q C P R T V L D Q D Y W T Y G L M
 
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