fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003387 not found in 321aa AT5G16600.1 1st_1st 0.564870259 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G16600.1     MGRQPCCDKVGLKKGPWTIEEDKKLINFILTNGHCCWRALPKLSGLLRCGKSCRLRWINY
pt003387_POPTR_ MGRQPCCDKVGLKKGPWTSDEDKKLITFILANGQCCWRAVPKLAGLLRCGKSCRLRWTNY
                ****************** :******.***:**:*****:***:************* **

AT5G16600.1     LRPDLKRGLLSEYEEQKVINLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
pt003387_POPTR_ LRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
                ***************: **:****************************************

AT5G16600.1     IDPLTHKPLSE-------------------QEASQQA--QGRKKSLVPHDDKN--PKQDQ
pt003387_POPTR_ IDPLTHKPLSTIETPPSPPPQQEVQVQENIQEIEQQAVQQSCSTNIVSELDQNREPETSL
                **********                    ** .***  *. ...:*.. *:*  *: . 

AT5G16600.1     QTKDEQEQHQLEQALEKNNTSVSGDGFCIDEVPLLNPHEILIDISSSHHHHSNDDNVNIN
pt003387_POPTR_ RSTVTQEEEINNMAASTYGTMEQTDGFCIDEVPLIEPHEILVP-------------CGLS
                ::.  **:.  : * .. .*  . **********::*****:               .:.

AT5G16600.1     TSKFTSPSSSSSSTSSCISSVVPGDEFSKFFDEMEILDLKWLSSDDSLGDDISKDGKFNN
pt003387_POPTR_ PSSTPAPTSSSSSSTSSSSSSYGSN---NILEDLLLPDFEW---------------PINN
                .*. .:*:*****::*. **   .:   :::::: : *::*                :**

AT5G16600.1     STV----DTMNLWD------INDLSSLDMF---MNEHDDGFIGNGNGCSRMVLDQDSWTF
pt003387_POPTR_ VDIGLWGDYLNSWDVLISDAVGDWKQTTMFDPPLNQ-----------CSRMILDQDSWTN
                  :    * :* **      :.* ..  **   :*:           ****:******* 

AT5G16600.1     DLL
pt003387_POPTR_ GLL
                .**
BoxShade v3.31 C (beta, 970507) Output
AT5G16600.1     M G R Q P C C D K V G L K K G P W T I E E D K K L I N F I L T N G H C C W R A L P K L S G L L R C G K S C R L R W I N Y
pt003387_POPTR_    M G R Q P C C D K V G L K K G P W T S D E D K K L I T F I L A N G Q C C W R A V P K L A G L L R C G K S C R L R W T N Y
 
AT5G16600.1     L R P D L K R G L L S E Y E E Q K V I N L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
pt003387_POPTR_    L R P D L K R G L L S E Y E E K M V I D L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
 
AT5G16600.1     I D P L T H K P L S E - - - - - - - - - - - - - - - - - - - Q E A S Q Q A - - Q G R K K S L V P H D D K N - - P K Q D Q
pt003387_POPTR_    I D P L T H K P L S T I E T P P S P P P Q Q E V Q V Q E N I Q E I E Q Q A V Q Q S C S T N I V S E L D Q N R E P E T S L
 
AT5G16600.1     Q T K D E Q E Q H Q L E Q A L E K N N T S V S G D G F C I D E V P L L N P H E I L I D I S S S H H H H S N D D N V N I N
pt003387_POPTR_    R S T V T Q E E E I N N M A A S T Y G T M E Q T D G F C I D E V P L I E P H E I L V P - - - - - - - - - - - - - C G L S
 
AT5G16600.1     T S K F T S P S S S S S S T S S C I S S V V P G D E F S K F F D E M E I L D L K W L S S D D S L G D D I S K D G K F N N
pt003387_POPTR_    P S S T P A P T S S S S S S T S S S S S S Y G S N - - - N I L E D L L L P D F E W - - - - - - - - - - - - - - - P I N N
 
AT5G16600.1     S T V - - - - D T M N L W D - - - - - - I N D L S S L D M F - - - M N E H D D G F I G N G N G C S R M V L D Q D S W T F
pt003387_POPTR_    V D I G L W G D Y L N S W D V L I S D A V G D W K Q T T M F D P P L N Q - - - - - - - - - - - C S R M I L D Q D S W T N
 
AT5G16600.1     D L L
pt003387_POPTR_    G L L
 
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