fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os033534 not found in 279aa AT1G66230.1 1st_not 0.520958083 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G16600.1     MGRQPCCDKVGLKKGPWTIEEDKKLINFILTNGHCCWRALPKLSGLLRCGKSCRLRWINY
Os033534_Os09t0 MGRQPCCDKVGLKKGPWTAEEDQKLVSFLLGNGQCCWRAVPKLAGLLRCGKSCRLRWTNY
                ****************** ***:**:.*:* **:*****:***:************* **

AT5G16600.1     LRPDLKRGLLSEYEEQKVINLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
Os033534_Os09t0 LRPDLKRGLLSETEEKTVIDLHEQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
                ************ **:.**:** *************************************

AT5G16600.1     IDPLTHKPLSEQEASQQAQGRKKSLVPHDDKNPKQDQQTKDEQEQHQLEQALEKNNTSVS
Os033534_Os09t0 IDPVTHKPL--YPAPPLADG----------GSPEQKVPEEEEEVEEKSSAAVESSTSTCA
                ***:*****    *.  *:*           .*:*.   ::*: :.: . *:*...:: :

AT5G16600.1     G-DGFCIDEVPLLNPHEILI----DISSSHHHHSNDDNVNINTSKFTSPSSSSSSTSSCI
Os033534_Os09t0 GHDVFCTDEVPMLHLDDIVLPPPCDVVG-------------DTAGSPAESSSTSTSSSGG
                * * ** ****:*: .:*::    *: .             :*:  .: ***:*::**  

AT5G16600.1     SSVVPGDEFSKFFDEMEILD-LKWLSSDDSLGDDISKDGKFNNSTVDTMNLWDINDLSSL
Os033534_Os09t0 GGI----------DEEWLLPIMEWPES---------------------MYLMGLDD---V
                ..:          **  :*  ::* .*                     * * .::*   :

AT5G16600.1     DMFMN---------EHDDGFIGNGNGCSRMVL----DQDSWTFDLL
Os033534_Os09t0 DMVTTAAPAMATSWEFEDPF----NAYQRIALFDHHHELTWA----
                **. .         *.:* *    *. .*:.*    .: :*:
BoxShade v3.31 C (beta, 970507) Output
AT5G16600.1     M G R Q P C C D K V G L K K G P W T I E E D K K L I N F I L T N G H C C W R A L P K L S G L L R C G K S C R L R W I N Y
Os033534_Os09t0    M G R Q P C C D K V G L K K G P W T A E E D Q K L V S F L L G N G Q C C W R A V P K L A G L L R C G K S C R L R W T N Y
 
AT5G16600.1     L R P D L K R G L L S E Y E E Q K V I N L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
Os033534_Os09t0    L R P D L K R G L L S E T E E K T V I D L H E Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
 
AT5G16600.1     I D P L T H K P L S E Q E A S Q Q A Q G R K K S L V P H D D K N P K Q D Q Q T K D E Q E Q H Q L E Q A L E K N N T S V S
Os033534_Os09t0    I D P V T H K P L - - Y P A P P L A D G - - - - - - - - - - G S P E Q K V P E E E E E V E E K S S A A V E S S T S T C A
 
AT5G16600.1     G - D G F C I D E V P L L N P H E I L I - - - - D I S S S H H H H S N D D N V N I N T S K F T S P S S S S S S T S S C I
Os033534_Os09t0    G H D V F C T D E V P M L H L D D I V L P P P C D V V G - - - - - - - - - - - - - D T A G S P A E S S S T S T S S S G G
 
AT5G16600.1     S S V V P G D E F S K F F D E M E I L D - L K W L S S D D S L G D D I S K D G K F N N S T V D T M N L W D I N D L S S L
Os033534_Os09t0    G G I - - - - - - - - - - D E E W L L P I M E W P E S - - - - - - - - - - - - - - - - - - - - - M Y L M G L D D - - - V
 
AT5G16600.1     D M F M N - - - - - - - - - E H D D G F I G N G N G C S R M V L - - - - D Q D S W T F D L L
Os033534_Os09t0    D M V T T A A P A M A T S W E F E D P F - - - - N A Y Q R I A L F D H H H E L T W A - - - -
 
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