fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb005866 not found in 311aa AT1G66230.1 1st_not 0.500998003 II
Sb005865 not found in 287aa AT5G16600.1 not_1st 0.499001996 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G16600.1     MGRQPCCDKVGLKKGPWTIEEDKKLINFILTNGHCCWRALPKLSGLLRCGKSCRLRWINY
Sb005865_Sorbi1 MGRQPCCAKVGLKRGPWTVEEDQKLVTFLLTNGHCCWRAVPKLAGLLRCGKSCRLRWTNY
Sb005866_Sorbi1 MGRQPCCDKVGLKKGPWTAEEDQKLVTFLLANGHCCWRAVPKLAGLLRCGKSCRLRWTNY
                ******* *****:**** ***:**:.*:*:********:***:************* **

AT5G16600.1     LRPDLKRGLLSEYEEQKVINLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
Sb005865_Sorbi1 LRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNHWNTHIKKKLRKMG
Sb005866_Sorbi1 LRPDVKRGLLSSEEERTVIDLHEQLGNRWSKIASQLPGRTDNEIKNHWNTHIKKKLRKMG
                ****:******. **:.**:** ***********:*************************

AT5G16600.1     IDPLTHKPLSEQEASQQAQGRKKSLVPHDDKNPKQDQQTKD------EQEQHQLEQALEK
Sb005865_Sorbi1 IDPVTHKPL-HQPASP----------PPPPPLTRQEQEEKDT-GGSPEEEEEEE---IVT
Sb005866_Sorbi1 IDPVTHKPL-HQPAS-------------PPPLTRQEQ---DTGGGSPEKEEKEKEKAVVA
                ***:***** .* **                 .:*:*   *      *:*:.:    :  

AT5G16600.1     NNTSVSGDGFCIDEVP---LLNPHEILID-------ISSSHHHHSNDDNVNINTSKFTSP
Sb005865_Sorbi1 AI-TAGHDASCTDEVPMALLLDDMDIVLPGDDVVGAQAAACVG------------TVYSP
Sb005866_Sorbi1 ATPSVGHETFCADEVLMAHLLD--DIVLP------PPATSNSGLTND-------TTASSP
                   :.. :  * ***    **:  :*::         :::               .  **

AT5G16600.1     SSSSSSTS------SCISSVVPGDEFS----------KFFDEMEILDLKWLSSDDSLGDD
Sb005865_Sorbi1 ESSSSS--------SSYSAS--AAALSGGSSSSSVDGECPDWLPMMD--WPEPIWQLEDV
Sb005866_Sorbi1 DSSSSSSSSSSSSPSSYSASVPAAASSSGGSSGADDGEWPEWPQVME--WPESTMWLDDV
                .*****        *. *:   .   *          :  :   :::  * ..   * * 

AT5G16600.1     ISKDGKFNNSTVDTMNLWDIND-----LSSLDMFMNEHDDGFIGNGNGCSRMVLDQDSWT
Sb005865_Sorbi1 VTA-----------RTPWEFEDPFV--YQRIALF-----D--------------HQETF-
Sb005866_Sorbi1 VTTG---------PATAWEFEDPFVITYQRIDLFD-DHDD--------------QQETWN
                ::             . *:::*      . : :*     *              .*::: 

AT5G16600.1     FD-----LL
Sb005865_Sorbi1 ---------
Sb005866_Sorbi1 NDDGRVELF
BoxShade v3.31 C (beta, 970507) Output
AT5G16600.1     M G R Q P C C D K V G L K K G P W T I E E D K K L I N F I L T N G H C C W R A L P K L S G L L R C G K S C R L R W I N Y
Sb005865_Sorbi1    M G R Q P C C A K V G L K R G P W T V E E D Q K L V T F L L T N G H C C W R A V P K L A G L L R C G K S C R L R W T N Y
Sb005866_Sorbi1    M G R Q P C C D K V G L K K G P W T A E E D Q K L V T F L L A N G H C C W R A V P K L A G L L R C G K S C R L R W T N Y
 
AT5G16600.1     L R P D L K R G L L S E Y E E Q K V I N L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
Sb005865_Sorbi1    L R P D V K R G L L S S E E E R T V I D L H E Q L G N R W S K I A S Q L P G R T D N E I K N H W N T H I K K K L R K M G
Sb005866_Sorbi1    L R P D V K R G L L S S E E E R T V I D L H E Q L G N R W S K I A S Q L P G R T D N E I K N H W N T H I K K K L R K M G
 
AT5G16600.1     I D P L T H K P L S E Q E A S Q Q A Q G R K K S L V P H D D K N P K Q D Q Q T K D - - - - - - E Q E Q H Q L E Q A L E K
Sb005865_Sorbi1    I D P V T H K P L - H Q P A S P - - - - - - - - - - P P P P P L T R Q E Q E E K D T - G G S P E E E E E E E - - - I V T
Sb005866_Sorbi1    I D P V T H K P L - H Q P A S - - - - - - - - - - - - - P P P L T R Q E Q - - - D T G G G S P E K E E K E K E K A V V A
 
AT5G16600.1     N N T S V S G D G F C I D E V P - - - L L N P H E I L I D - - - - - - - I S S S H H H H S N D D N V N I N T S K F T S P
Sb005865_Sorbi1    A I - T A G H D A S C T D E V P M A L L L D D M D I V L P G D D V V G A Q A A A C V G - - - - - - - - - - - - T V Y S P
Sb005866_Sorbi1    A T P S V G H E T F C A D E V L M A H L L D - - D I V L P - - - - - - P P A T S N S G L T N D - - - - - - - T T A S S P
 
AT5G16600.1     S S S S S S T S - - - - - - S C I S S V V P G D E F S - - - - - - - - - - K F F D E M E I L D L K W L S S D D S L G D D
Sb005865_Sorbi1    E S S S S S - - - - - - - - S S Y S A S - - A A A L S G G S S S S S V D G E C P D W L P M M D - - W P E P I W Q L E D V
Sb005866_Sorbi1    D S S S S S S S S S S S S P S S Y S A S V P A A A S S S G G S S G A D D G E W P E W P Q V M E - - W P E S T M W L D D V
 
AT5G16600.1     I S K D G K F N N S T V D T M N L W D I N D - - - - - L S S L D M F M N E H D D G F I G N G N G C S R M V L D Q D S W T
Sb005865_Sorbi1    V T A - - - - - - - - - - - R T P W E F E D P F V - - Y Q R I A L F - - - - - D - - - - - - - - - - - - - - H Q E T F -
Sb005866_Sorbi1    V T T G - - - - - - - - - P A T A W E F E D P F V I T Y Q R I D L F D - D H D D - - - - - - - - - - - - - - Q Q E T W N
 
AT5G16600.1     F D - - - - - L L
Sb005865_Sorbi1    - - - - - - - - -
Sb005866_Sorbi1    N D D G R V E L F
 
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