fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031703 not found in 336aa AT1G66230.1 1st_not 0.560878243 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G16600.1     MGRQPCCDKVGLKKGPWTIEEDKKLINFILTNGHCCWRALPKLSGLLRCGKSCRLRWINY
gm031703_Glyma1 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNY
                ****************** **************:*****:***:************* **

AT5G16600.1     LRPDLKRGLLSEYEEQKVINLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
gm031703_Glyma1 LRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMG
                ***************: **:************************************:***

AT5G16600.1     IDPLTHKPLSEQEASQQAQGRKKSLVPHDDK--NPKQDQQ---------TKDEQEQHQLE
gm031703_Glyma1 IDPVTHKPLSNKTEQTQAQ-------PDEQQTHQPLQEQQEEPIPVEKDTKFEPEKEQNK
                ***:******::  . ***       *.:::  :* *:**         ** * *:.* :

AT5G16600.1     QALEKNNTSVSG------------------------DGFCIDEVPLLNPHEILIDISSSH
gm031703_Glyma1 EP-EKPESSIESLTITEEAKEEDQIMTPLFDSWELMNEFCTDEVPIIESNEILVPSAPSS
                :. ** ::*:..                        : ** ****:::.:***:  :.* 

AT5G16600.1     HHHSNDDNVNINTSKFTSPSSSSSSTSSCISSVVPGDEFSKFFDEMEILDLKWLSSDDSL
gm031703_Glyma1 ----------------TSPTTTTTTSSSTSTSASSNSNSSNFLEDLLLPDFEW--SDD--
                                ***:::::::**  :*. ...: *:*:::: : *::*  ***  

AT5G16600.1     GDDISKDGKFNNSTVDTMNLWDINDLSSLDMFMNEHDDG-------FIGNGNGCSRMVLD
gm031703_Glyma1 ----YNDTNFDNNNNSSMALWDDDFIRSWNLLIND-DDGDGDRKQVFEAPINQYPRVIMD
                     :* :*:*.. .:* *** : : * ::::*: ***       * .  *  .*:::*

AT5G16600.1     QDSWTFDLL
gm031703_Glyma1 SDSWAYGLF
                .***::.*:
BoxShade v3.31 C (beta, 970507) Output
AT5G16600.1     M G R Q P C C D K V G L K K G P W T I E E D K K L I N F I L T N G H C C W R A L P K L S G L L R C G K S C R L R W I N Y
gm031703_Glyma1    M G R Q P C C D K V G L K K G P W T A E E D K K L I N F I L T N G Q C C W R A V P K L A G L L R C G K S C R L R W T N Y
 
AT5G16600.1     L R P D L K R G L L S E Y E E Q K V I N L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
gm031703_Glyma1    L R P D L K R G L L S E Y E E K M V I D L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L K K M G
 
AT5G16600.1     I D P L T H K P L S E Q E A S Q Q A Q G R K K S L V P H D D K - - N P K Q D Q Q - - - - - - - - - T K D E Q E Q H Q L E
gm031703_Glyma1    I D P V T H K P L S N K T E Q T Q A Q - - - - - - - P D E Q Q T H Q P L Q E Q Q E E P I P V E K D T K F E P E K E Q N K
 
AT5G16600.1     Q A L E K N N T S V S G - - - - - - - - - - - - - - - - - - - - - - - - D G F C I D E V P L L N P H E I L I D I S S S H
gm031703_Glyma1    E P - E K P E S S I E S L T I T E E A K E E D Q I M T P L F D S W E L M N E F C T D E V P I I E S N E I L V P S A P S S
 
AT5G16600.1     H H H S N D D N V N I N T S K F T S P S S S S S S T S S C I S S V V P G D E F S K F F D E M E I L D L K W L S S D D S L
gm031703_Glyma1    - - - - - - - - - - - - - - - - T S P T T T T T T S S S T S T S A S S N S N S S N F L E D L L L P D F E W - - S D D - -
 
AT5G16600.1     G D D I S K D G K F N N S T V D T M N L W D I N D L S S L D M F M N E H D D G - - - - - - - F I G N G N G C S R M V L D
gm031703_Glyma1    - - - - Y N D T N F D N N N N S S M A L W D D D F I R S W N L L I N D - D D G D G D R K Q V F E A P I N Q Y P R V I M D
 
AT5G16600.1     Q D S W T F D L L
gm031703_Glyma1    S D S W A Y G L F
 
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