fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16770.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013140 not found in 300aa AT3G02940.1 1st_not 0.447619047 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G16770.2     MGRSPCCDENGLKKGPWTQEEDDKLIDHIQKHGHGSWRALPKQAGLNRCGKSCRLRWTNY
pt013140_POPTR_ MAESPFQDESALKKGPWTPEEDQKLIDYVQKHGHGSWRALPMLAGLNRCGKSCRLRWTNY
                *..**  **..******* ***:****::************  *****************

AT5G16770.2     LRPDIKRGNFTEEEEQTIINLHSLLGNKWSSIAGNLPGRTDNEIKNYWNTHLRKKLLQMG
pt013140_POPTR_ LRPDIKRGNFSEEEQQMIIDFHQVLGNKWSAIAQHLPGRTDNEIKNFWNTHLKKKLLQMG
                **********:***:* **::*.:******:** :***********:*****:*******

AT5G16770.2     IDPVTHRPRTDHLNVLAALPQLI-AAANFNSLLNLNQN----VQLDATTLAKAQLLHTMI
pt013140_POPTR_ IDPVTHRPRTD-LNIIANLPQLLAAAANFSNLMNIPWDNAIKAQVDATKL---QLLHNIL
                *********** **::* ****: *****..*:*:  :    .*:***.*   ****.::

AT5G16770.2     QVLSTNNNTTNPSFSSSTMQNSNTNLF--GQASYLENQNLFGQSQ-NFSHILEDENLMVK
pt013140_POPTR_ QVL------------------GNKGLLKCGEDG-LSSQGINAQAQSNFPN----------
                ***                  .*..*:  *: . *..*.: .*:* **.:          

AT5G16770.2     TQIIDNPLDSFS--SPIQPGFQDDHNS--------------LPLLVPASPEESKETQRMI
pt013140_POPTR_ ---IDAPQQPFSDHNPIKDSKSRTHNSDQLVSSYAFPTSNTLPQLVSASPECS--SANTI
                   ** * :.**  .**: . .  ***              ** **.**** *  : . *

AT5G16770.2     KNKDIVDYHHHDASNPSSSNSTFTQDHHHPWCDTIDDGASDSFWKEIIEQTCSEPWPFPE
pt013140_POPTR_ NPNDII-------SNPSNATSTTFE----AWRNLMDDGANDNYWIDIIE-----------
                : :**:       ****.:.**  :    .* : :****.*.:* :***
BoxShade v3.31 C (beta, 970507) Output
AT5G16770.2     M G R S P C C D E N G L K K G P W T Q E E D D K L I D H I Q K H G H G S W R A L P K Q A G L N R C G K S C R L R W T N Y
pt013140_POPTR_    M A E S P F Q D E S A L K K G P W T P E E D Q K L I D Y V Q K H G H G S W R A L P M L A G L N R C G K S C R L R W T N Y
 
AT5G16770.2     L R P D I K R G N F T E E E E Q T I I N L H S L L G N K W S S I A G N L P G R T D N E I K N Y W N T H L R K K L L Q M G
pt013140_POPTR_    L R P D I K R G N F S E E E Q Q M I I D F H Q V L G N K W S A I A Q H L P G R T D N E I K N F W N T H L K K K L L Q M G
 
AT5G16770.2     I D P V T H R P R T D H L N V L A A L P Q L I - A A A N F N S L L N L N Q N - - - - V Q L D A T T L A K A Q L L H T M I
pt013140_POPTR_    I D P V T H R P R T D - L N I I A N L P Q L L A A A A N F S N L M N I P W D N A I K A Q V D A T K L - - - Q L L H N I L
 
AT5G16770.2     Q V L S T N N N T T N P S F S S S T M Q N S N T N L F - - G Q A S Y L E N Q N L F G Q S Q - N F S H I L E D E N L M V K
pt013140_POPTR_    Q V L - - - - - - - - - - - - - - - - - - G N K G L L K C G E D G - L S S Q G I N A Q A Q S N F P N - - - - - - - - - -
 
AT5G16770.2     T Q I I D N P L D S F S - - S P I Q P G F Q D D H N S - - - - - - - - - - - - - - L P L L V P A S P E E S K E T Q R M I
pt013140_POPTR_    - - - I D A P Q Q P F S D H N P I K D S K S R T H N S D Q L V S S Y A F P T S N T L P Q L V S A S P E C S - - S A N T I
 
AT5G16770.2     K N K D I V D Y H H H D A S N P S S S N S T F T Q D H H H P W C D T I D D G A S D S F W K E I I E Q T C S E P W P F P E
pt013140_POPTR_    N P N D I I - - - - - - - S N P S N A T S T T F E - - - - A W R N L M D D G A N D N Y W I D I I E - - - - - - - - - - -
 
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