fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16770.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001093 not found in 341aa AT1G34670.1 not_not 0.411111111 III
Pt001300 not found in 337aa AT1G34670.1 not_not 0.401587301 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G16770.2     MGRSPCCDENGLKKGPWTQEEDDKLIDHIQKHGHGSWRALPKQAGLNRCGKSCRLRWTNY
pt001300_POPTR_ MGRSPCCDENGLKKGPWTPEEDQKLVDYIQKHGHGSWRALPKLADLNRCGKSCRLRWTNY
pt001093_POPTR_ MGRSPCCDESGLKKGPWTPEEDQKLVKYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNY
                *********.******** ***:**:.:************** *.***************

AT5G16770.2     LRPDIKRGNFTEEEEQTIINLHSLLGNKWSSIAGNLPGRTDNEIKNYWNTHLRKKLLQMG
pt001300_POPTR_ LRPDIKRGKFSQDEEQTILHLHSIIGNKWSTIATHLPGRTDNEIKNFWNTHLKKKLIQMG
pt001093_POPTR_ LRPDIKRGKFSQEEEQTILNLHSILGNKWSAIAGHLPGRTDNEIKNFWNTHLKKKLIQMG
                ********:*:::*****::***::*****:** :***********:*****:***:***

AT5G16770.2     IDPVTHRPRTDHLNVLAALPQLIAAANFNSLLN---LNQN---VQLDATTLAKAQLLHTM
pt001300_POPTR_ FDPMTHQPRTD---FFDSLPQLIALANLRDLMEHRPLDEHAMRLQEEAVQLAKLQYLQYL
pt001093_POPTR_ FDPMTHRPRTD---IFSSLPHLIALANLKELIDHHSLEEHALRLQTEAAQMAKLQYLQYL
                :**:**:****   .: :**:*** **:..*::   *:::   :* :*. :** * *: :

AT5G16770.2     IQ---VLSTNNNTTNPSFSSST---------MQNS----NTNLFGQASYLENQ--NLFGQ
pt001300_POPTR_ LQ---SAASIPSTNSYGQNGIT---DMEVLNLLNSIPLIEENLVLNSSELENQGSNHFAN
pt001093_POPTR_ LQPQPPAASNNATSSNNLNNISAIGEMEAFNLLNSLASFKDSPVSSLSQFD------LSA
                :*     ::   *.. . .. :         : **    : . . . * ::      :. 

AT5G16770.2     SQN--------FSHILEDENLMVKTQIIDNPLDSFSSPIQPGF--QDDHNS------LPL
pt001300_POPTR_ ATSQLLHHPSVLSQ-LSDPQVPFSYQPSLNTEM-GQAPFLTTMPSQEGNNPTDSSWVLPS
pt001093_POPTR_ SSLQGINDLMPFSH-LPDLQIPCNYQTPPNKDVFDQAPELTVF--SQGENSPNSPWQLPS
                :          :*: * * ::  . *   *     .:*  . :  .:..*.      ** 

AT5G16770.2     --------LVPASPEESKETQRMIKNKDIVDYHHHDASNPSSSNSTFTQDHHHPWCDTID
pt001300_POPTR_ ---PTP--VLATVTDTS------ISNPG-------DASSTTSSYG---------------
pt001093_POPTR_ SSTPSPPSVFPLVPQNSG----MVNNLG-------DASS-TSSYV---------------
                        :..  .: *      :.* .       ***. :**                 

AT5G16770.2     DGASDSFWKE-IIEQTCSEPWPFPE---
pt001300_POPTR_ -GGTSSYWPEHFFED------PIMHEIS
pt001093_POPTR_ -GEAPSVWHD-ILEN------PLFHDIA
                 * : * * : ::*:      *: .
BoxShade v3.31 C (beta, 970507) Output
AT5G16770.2     M G R S P C C D E N G L K K G P W T Q E E D D K L I D H I Q K H G H G S W R A L P K Q A G L N R C G K S C R L R W T N Y
pt001300_POPTR_    M G R S P C C D E N G L K K G P W T P E E D Q K L V D Y I Q K H G H G S W R A L P K L A D L N R C G K S C R L R W T N Y
pt001093_POPTR_    M G R S P C C D E S G L K K G P W T P E E D Q K L V K Y I Q K H G H G S W R A L P K L A G L N R C G K S C R L R W T N Y
 
AT5G16770.2     L R P D I K R G N F T E E E E Q T I I N L H S L L G N K W S S I A G N L P G R T D N E I K N Y W N T H L R K K L L Q M G
pt001300_POPTR_    L R P D I K R G K F S Q D E E Q T I L H L H S I I G N K W S T I A T H L P G R T D N E I K N F W N T H L K K K L I Q M G
pt001093_POPTR_    L R P D I K R G K F S Q E E E Q T I L N L H S I L G N K W S A I A G H L P G R T D N E I K N F W N T H L K K K L I Q M G
 
AT5G16770.2     I D P V T H R P R T D H L N V L A A L P Q L I A A A N F N S L L N - - - L N Q N - - - V Q L D A T T L A K A Q L L H T M
pt001300_POPTR_    F D P M T H Q P R T D - - - F F D S L P Q L I A L A N L R D L M E H R P L D E H A M R L Q E E A V Q L A K L Q Y L Q Y L
pt001093_POPTR_    F D P M T H R P R T D - - - I F S S L P H L I A L A N L K E L I D H H S L E E H A L R L Q T E A A Q M A K L Q Y L Q Y L
 
AT5G16770.2     I Q - - - V L S T N N N T T N P S F S S S T - - - - - - - - - M Q N S - - - - N T N L F G Q A S Y L E N Q - - N L F G Q
pt001300_POPTR_    L Q - - - S A A S I P S T N S Y G Q N G I T - - - D M E V L N L L N S I P L I E E N L V L N S S E L E N Q G S N H F A N
pt001093_POPTR_    L Q P Q P P A A S N N A T S S N N L N N I S A I G E M E A F N L L N S L A S F K D S P V S S L S Q F D - - - - - - L S A
 
AT5G16770.2     S Q N - - - - - - - - F S H I L E D E N L M V K T Q I I D N P L D S F S S P I Q P G F - - Q D D H N S - - - - - - L P L
pt001300_POPTR_    A T S Q L L H H P S V L S Q - L S D P Q V P F S Y Q P S L N T E M - G Q A P F L T T M P S Q E G N N P T D S S W V L P S
pt001093_POPTR_    S S L Q G I N D L M P F S H - L P D L Q I P C N Y Q T P P N K D V F D Q A P E L T V F - - S Q G E N S P N S P W Q L P S
 
AT5G16770.2     - - - - - - - - L V P A S P E E S K E T Q R M I K N K D I V D Y H H H D A S N P S S S N S T F T Q D H H H P W C D T I D
pt001300_POPTR_    - - - P T P - - V L A T V T D T S - - - - - - I S N P G - - - - - - - D A S S T T S S Y G - - - - - - - - - - - - - - -
pt001093_POPTR_    S S T P S P P S V F P L V P Q N S G - - - - M V N N L G - - - - - - - D A S S - T S S Y V - - - - - - - - - - - - - - -
 
AT5G16770.2     D G A S D S F W K E - I I E Q T C S E P W P F P E - - -
pt001300_POPTR_    - G G T S S Y W P E H F F E D - - - - - - P I M H E I S
pt001093_POPTR_    - G E A P S V W H D - I L E N - - - - - - P L F H D I A
 
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