fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G16770.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027621 not found in 432aa AT1G34670.1 1st_not 0.409523809 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G16770.2     ---------------------------------MGRSPCCDENGLKKGPWTQEEDDKLID
Sb027621_Sorbi1 QEASRAKGGCRQVVSLLPNPTCTTLPPVPFHLSMGRSPCCDENGLKKGPWTPEEDQKLME
                                                 ****************** ***:**::

AT5G16770.2     HIQKHGHGSWRALPKQAGLNRCGKSCRLRWTNYLRPDIKRGNFTEEEEQTIINLHSLLGN
Sb027621_Sorbi1 YIQKHGHGSWRALPRLAGLNRCGKSCRLRWTNYLRPDIKRGKFTQEEEQTILQLHSVLGN
                :*************: *************************:**:******::***:***

AT5G16770.2     KWSSIAGNLPGRTDNEIKNYWNTHLRKKLLQMGIDPVTHRPRTDHLNVLAALPQLIAAAN
Sb027621_Sorbi1 KWSAIAKHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHRPRTD---FFAALPQLIALAN
                ***:** :***********:*****:***:***:**:*******   .:******** **

AT5G16770.2     FNSLL------NLNQNVQLDATTLAKAQLLHTMIQVLSTNNNTTNPSFSSSTMQNSNTNL
Sb027621_Sorbi1 LRQLVEQRPWDDHTARIQVEAVQAAKLQCLQNLLQ--SAASIATSPSSSS-----INTNT
                :..*:      : . .:*::*.  ** * *:.::*  *: . :*.** **      *** 

AT5G16770.2     FGQASYLENQNLFGQSQNFSHILEDENLMVKTQIIDNPLDSFSSPIQPGF------QD--
Sb027621_Sorbi1 I--PSDLEQIGLLSPPQ---------------------MSSLSTLPSPSFLESISGQDIA
                :  .* **: .*:. .*                     :.*:*:  .*.*      **  

AT5G16770.2     DHNSLP-LLVPASPEESKETQRMIKNKDIVDYHHHDASNPSSS----NST-----FTQDH
Sb027621_Sorbi1 AAGQLPDIQIPSSFFEQQPTSN--------DANQHSDFTPKSSVEGENGTPKTLLLSENS
                  ..** : :*:*  *.: *..        * ::*.  .*.**    *.*     :::: 

AT5G16770.2     HHPWCD------------TIDDGASDSF--WKEII-EQTCSEPWPFPE
Sb027621_Sorbi1 LPPLTDFPISNLGDACGASSCDGSSIPFPSWPELFDEQFICE---FV-
                  *  *            :  **:* .*  * *:: **  .*   *
BoxShade v3.31 C (beta, 970507) Output
AT5G16770.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R S P C C D E N G L K K G P W T Q E E D D K L I D
Sb027621_Sorbi1    Q E A S R A K G G C R Q V V S L L P N P T C T T L P P V P F H L S M G R S P C C D E N G L K K G P W T P E E D Q K L M E
 
AT5G16770.2     H I Q K H G H G S W R A L P K Q A G L N R C G K S C R L R W T N Y L R P D I K R G N F T E E E E Q T I I N L H S L L G N
Sb027621_Sorbi1    Y I Q K H G H G S W R A L P R L A G L N R C G K S C R L R W T N Y L R P D I K R G K F T Q E E E Q T I L Q L H S V L G N
 
AT5G16770.2     K W S S I A G N L P G R T D N E I K N Y W N T H L R K K L L Q M G I D P V T H R P R T D H L N V L A A L P Q L I A A A N
Sb027621_Sorbi1    K W S A I A K H L P G R T D N E I K N F W N T H L K K K L I Q M G F D P M T H R P R T D - - - F F A A L P Q L I A L A N
 
AT5G16770.2     F N S L L - - - - - - N L N Q N V Q L D A T T L A K A Q L L H T M I Q V L S T N N N T T N P S F S S S T M Q N S N T N L
Sb027621_Sorbi1    L R Q L V E Q R P W D D H T A R I Q V E A V Q A A K L Q C L Q N L L Q - - S A A S I A T S P S S S S - - - - - I N T N T
 
AT5G16770.2     F G Q A S Y L E N Q N L F G Q S Q N F S H I L E D E N L M V K T Q I I D N P L D S F S S P I Q P G F - - - - - - Q D - -
Sb027621_Sorbi1    I - - P S D L E Q I G L L S P P Q - - - - - - - - - - - - - - - - - - - - - M S S L S T L P S P S F L E S I S G Q D I A
 
AT5G16770.2     D H N S L P - L L V P A S P E E S K E T Q R M I K N K D I V D Y H H H D A S N P S S S - - - - N S T - - - - - F T Q D H
Sb027621_Sorbi1    A A G Q L P D I Q I P S S F F E Q Q P T S N - - - - - - - - D A N Q H S D F T P K S S V E G E N G T P K T L L L S E N S
 
AT5G16770.2     H H P W C D - - - - - - - - - - - - T I D D G A S D S F - - W K E I I - E Q T C S E P W P F P E
Sb027621_Sorbi1    L P P L T D F P I S N L G D A C G A S S C D G S S I P F P S W P E L F D E Q F I C E - - - F V -
 
0