fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G17430.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050262 not found in 616aa AT5G17430.1 1st_1st 0.409045226 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G17430.1     MNSMNNWLGFSLSPHD----QNHHRT---------DVDSSTTRTAVDVAGGYCFDLAAPS
gm050262_Glyma1 MGSM-NLLGFSLSPQEHPSSQDHSQTAPSRFCFNPDGISST-----DVAGD-CFDLT--S
                *.** * *******::    *:* :*         *  ***     ****. ****:  *

AT5G17430.1     DESSAVQTSFLSPFGVTLEAFTRDNNSH-SRDWDIN--------GGACNNINNN------
gm050262_Glyma1 DSTPHLLN--LPSYGI-YEAFHRSNNIHTTQDWKENYNSQNLLLGTSCSNQNMNHNHQQQ
                *.:. : .  *..:*:  *** *.** * ::**. *        * :*.* * *      

AT5G17430.1     EQNGPKLENFLGRTTTIYNTNETVVDGNGDCGGGDGGGGG-----SLGLSMIKTWLSNHS
gm050262_Glyma1 QQQQPKLENFLGGHS--FGEHEQPY----------GAGIGRWRRRSIGLSMIKTWLRNQP
                :*: ********  :  :. :*             *.* *     *:********* *:.

AT5G17430.1     VANANHQDNGNGARGLSLSMNSSTSDSNNYNNNDDVVQEKTIVDVVETTPKKTIESFGQR
gm050262_Glyma1 PHSENNNNNNNESGGNS----RSKSSSDNKQPHTTAALDTTQTGAIETAPRKSIDTFGQR
                  . *:::*.* : * *     *.*.*:* : :  .. :.* ...:**:*:*:*::****

AT5G17430.1     TSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYW
gm050262_Glyma1 TSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQ---GGYDKEEKAARAYDLAALKYW
                *************************:**********   *********************

AT5G17430.1     GTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQA
gm050262_Glyma1 GTTTTTNFPISHYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQA
                *********:*.****:*******************************************

AT5G17430.1     RIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPI
gm050262_Glyma1 RIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLSAVTNFDMSRYDVKSILESTTLPI
                ****************.**********:****************.**:**:****.:***

AT5G17430.1     GSSAKRLKD-------VNNPVPA-------MMISNNVSESANNVSGWQNTAFQHHQGMDL
gm050262_Glyma1 GGAAKRLKDMEQVELRVENVHRADQEDHSSIMNSHLTQGIINNYAAGGTTATHHHNWHNA
                *.:******       *:*   *       :* *: ..   ** :.  .** :**:  : 

AT5G17430.1     SLLQQQQERYVGYYNGGNLSTESTRVCFKQEEEQQHFLRNSPSHMTNVDHHSSTSDDSVT
gm050262_Glyma1 LAFHQPQPCTTIHYPYG----QRINWC-KQEQDNSD---ASHSFMDSASIDNSSSSNSVV
                  ::* *   . :*  *    :  . * ***:::..    * *.* ... ..*:*.:**.

AT5G17430.1     VCGNVVSYGGYQGF-AIPVGTSVNY------------DPFTAAEIAYNARNHYYYAQHQQ
gm050262_Glyma1 YDG----YGGGGGYNVIPMGTTTTVALGYESVYGSTTDPYHA-----HARNLYYLTQQQ-
                  *    ***  *: .**:**:..             **: *     :*** ** :*:* 

AT5G17430.1     QQQIQQSPGGDFPVAISNNHSSNMYFHGEGGGEGAPT----------FSVWNDT------
gm050262_Glyma1 ------------PSSVDAVKAS-AYDQGSACNTWVPTAIPTHAPRSSFLSLSLTSRILIS
                            * ::.  ::*  * :*.. .  .**          *   . *      

AT5G17430.1     ------------------
gm050262_Glyma1 LGMCGQISLGCFYYQRAL
BoxShade v3.31 C (beta, 970507) Output
AT5G17430.1     M N S M N N W L G F S L S P H D - - - - Q N H H R T - - - - - - - - - D V D S S T T R T A V D V A G G Y C F D L A A P S
gm050262_Glyma1    M G S M - N L L G F S L S P Q E H P S S Q D H S Q T A P S R F C F N P D G I S S T - - - - - D V A G D - C F D L T - - S
 
AT5G17430.1     D E S S A V Q T S F L S P F G V T L E A F T R D N N S H - S R D W D I N - - - - - - - - G G A C N N I N N N - - - - - -
gm050262_Glyma1    D S T P H L L N - - L P S Y G I - Y E A F H R S N N I H T T Q D W K E N Y N S Q N L L L G T S C S N Q N M N H N H Q Q Q
 
AT5G17430.1     E Q N G P K L E N F L G R T T T I Y N T N E T V V D G N G D C G G G D G G G G G - - - - - S L G L S M I K T W L S N H S
gm050262_Glyma1    Q Q Q Q P K L E N F L G G H S - - F G E H E Q P Y - - - - - - - - - - G A G I G R W R R R S I G L S M I K T W L R N Q P
 
AT5G17430.1     V A N A N H Q D N G N G A R G L S L S M N S S T S D S N N Y N N N D D V V Q E K T I V D V V E T T P K K T I E S F G Q R
gm050262_Glyma1    P H S E N N N N N N N E S G G N S - - - - R S K S S S D N K Q P H T T A A L D T T Q T G A I E T A P R K S I D T F G Q R
 
AT5G17430.1     T S I Y R G V T R H R W T G R Y E A H L W D N S C K R E G Q T R K G R Q V Y L G G Y D K E E K A A R A Y D L A A L K Y W
gm050262_Glyma1    T S I Y R G V T R H R W T G R Y E A H L W D N S C R R E G Q T R K G R Q - - - G G Y D K E E K A A R A Y D L A A L K Y W
 
AT5G17430.1     G T T T T T N F P L S E Y E K E V E E M K H M T R Q E Y V A S L R R K S S G F S R G A S I Y R G V T R H H Q H G R W Q A
gm050262_Glyma1    G T T T T T N F P I S H Y E K E L E E M K H M T R Q E Y V A S L R R K S S G F S R G A S I Y R G V T R H H Q H G R W Q A
 
AT5G17430.1     R I G R V A G N K D L Y L G T F G T Q E E A A E A Y D I A A I K F R G L S A V T N F D M N R Y N V K A I L E S P S L P I
gm050262_Glyma1    R I G R V A G N K D L Y L G T F S T Q E E A A E A Y D V A A I K F R G L S A V T N F D M S R Y D V K S I L E S T T L P I
 
AT5G17430.1     G S S A K R L K D - - - - - - - V N N P V P A - - - - - - - M M I S N N V S E S A N N V S G W Q N T A F Q H H Q G M D L
gm050262_Glyma1    G G A A K R L K D M E Q V E L R V E N V H R A D Q E D H S S I M N S H L T Q G I I N N Y A A G G T T A T H H H N W H N A
 
AT5G17430.1     S L L Q Q Q Q E R Y V G Y Y N G G N L S T E S T R V C F K Q E E E Q Q H F L R N S P S H M T N V D H H S S T S D D S V T
gm050262_Glyma1    L A F H Q P Q P C T T I H Y P Y G - - - - Q R I N W C - K Q E Q D N S D - - - A S H S F M D S A S I D N S S S S N S V V
 
AT5G17430.1     V C G N V V S Y G G Y Q G F - A I P V G T S V N Y - - - - - - - - - - - - D P F T A A E I A Y N A R N H Y Y Y A Q H Q Q
gm050262_Glyma1    Y D G - - - - Y G G G G G Y N V I P M G T T T T V A L G Y E S V Y G S T T D P Y H A - - - - - H A R N L Y Y L T Q Q Q -
 
AT5G17430.1     Q Q Q I Q Q S P G G D F P V A I S N N H S S N M Y F H G E G G G E G A P T - - - - - - - - - - F S V W N D T - - - - - -
gm050262_Glyma1    - - - - - - - - - - - - P S S V D A V K A S - A Y D Q G S A C N T W V P T A I P T H A P R S S F L S L S L T S R I L I S
 
AT5G17430.1     - - - - - - - - - - - - - - - - - -
gm050262_Glyma1    L G M C G Q I S L G C F Y Y Q R A L
 
0