fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G17490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000969 not found in 619aa AT2G01570.1 1st_not 0.522587268 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G17490.1     MKRSHQET------SVEEEAPSMVEKLENGCG---------GGGDDNMDEFLAVLGYKVR
pt000969_POPTR_ MKRDHQETIGGAGNSIGNKAESSSSSMATGKGKLWVEDDQDAGG---MDELLAVLGYKIK
                ***.****      *: ::* *  ..: .* *         .**   ***:*******::

AT5G17490.1     SSDMADVAQKLEQLEMVLSNDIASSSNAFNDTVHYNPSDLSGWAQSMLSDLNYYP--DLD
pt000969_POPTR_ SSEMADVAQKLEQLEMVLGSEDGISHLA-SDTVHYNPSDLSGWVQSMLSELNNLPSSDLD
                **:***************..: . *  * .*************.*****:**  *  ***

AT5G17490.1     ------------PNRICDL--------RPITDDDECC--------------SSNSNSNKR
pt000969_POPTR_ SSTLLSNNQDSNPSTMTSLDFPNNSQSKAFVDDSEYDLRAIPGVAAYPQQEFDKSNDRKR
                            *. : .*        :.:.**.*                 .:**..**

AT5G17490.1     IRL--------------------------GPWC----DSVTSESTRSVVLI--EETGVRL
pt000969_POPTR_ MKLTLVGSNTAPTLAVNSLQSSNSSCTPSSPQAIMAVSGTLSEPTRPVVLIDSQETGVRL
                ::*                          .* .    ... **.**.****  :******

AT5G17490.1     VQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIYRIHPSAA
pt000969_POPTR_ VHTLLACAEAIQQENLKLADALVKHIGVLAASQAGAMRKVATYFAEALARRIYKIFPQDH
                *::*:*****:* ***.*******::*:********* ***************:*.*.  

AT5G17490.1     AIDPSFEEILQMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQ
pt000969_POPTR_ CLDSSYSDTLEMHFYETCPYLKFAHFTANQAILEAFANASRVHVIDFGLKQGMQWPALMQ
                .:*.*:.: *:*:**::******************.:.:  *****:**:**********

AT5G17490.1     ALALRPGGPPSFRLTGVG--NPSNREGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLE
pt000969_POPTR_ ALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAQTIGVEFEFRGFVASSLADLE
                **********:*****:*  :*.* :.:*::*********:*****:*.*:.:. *:***

AT5G17490.1     PDMFETR-TESETLVVNSVFELHPVLSQPGSIEKLLATVKAVKPGLVTVVEQEANHNGDV
pt000969_POPTR_ AEMLDLRPPEVEAVAVNSVFELHRLLDRPGGIDKVLGSIKAMRPKIVTIVEQEANHNGPV
                .:*:: * .* *::.******** :*.:**.*:*:*.::**::* :**:********* *

AT5G17490.1     FLDRFNEALHYYSSLFDSLEDGVVIP-SQDRVMSEVYLGRQILNLVATEGSDRIERHETL
pt000969_POPTR_ FLDRFTEALHYYSSLFDSLEGSGVTPTSQDLVMSELYLGRQICNVVACEGADRVERHETL
                *****.**************.. * * *** ****:****** *:** **:**:******

AT5G17490.1     AQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAAS
pt000969_POPTR_ AQWRTRFDSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATS
                ****.*:.*******:***:******:**** .**********:*.***.*:*:****:*

AT5G17490.1     AWKLAAELRR-------------
pt000969_POPTR_ AWQLAAGDSRLRVNSAEFELPSQ
                **:***   *
BoxShade v3.31 C (beta, 970507) Output
AT5G17490.1     M K R S H Q E T - - - - - - S V E E E A P S M V E K L E N G C G - - - - - - - - - G G G D D N M D E F L A V L G Y K V R
pt000969_POPTR_    M K R D H Q E T I G G A G N S I G N K A E S S S S S M A T G K G K L W V E D D Q D A G G - - - M D E L L A V L G Y K I K
 
AT5G17490.1     S S D M A D V A Q K L E Q L E M V L S N D I A S S S N A F N D T V H Y N P S D L S G W A Q S M L S D L N Y Y P - - D L D
pt000969_POPTR_    S S E M A D V A Q K L E Q L E M V L G S E D G I S H L A - S D T V H Y N P S D L S G W V Q S M L S E L N N L P S S D L D
 
AT5G17490.1     - - - - - - - - - - - - P N R I C D L - - - - - - - - R P I T D D D E C C - - - - - - - - - - - - - - S S N S N S N K R
pt000969_POPTR_    S S T L L S N N Q D S N P S T M T S L D F P N N S Q S K A F V D D S E Y D L R A I P G V A A Y P Q Q E F D K S N D R K R
 
AT5G17490.1     I R L - - - - - - - - - - - - - - - - - - - - - - - - - - G P W C - - - - D S V T S E S T R S V V L I - - E E T G V R L
pt000969_POPTR_    M K L T L V G S N T A P T L A V N S L Q S S N S S C T P S S P Q A I M A V S G T L S E P T R P V V L I D S Q E T G V R L
 
AT5G17490.1     V Q A L V A C A E A V Q L E N L S L A D A L V K R V G L L A A S Q A G A M G K V A T Y F A E A L A R R I Y R I H P S A A
pt000969_POPTR_    V H T L L A C A E A I Q Q E N L K L A D A L V K H I G V L A A S Q A G A M R K V A T Y F A E A L A R R I Y K I F P Q D H
 
AT5G17490.1     A I D P S F E E I L Q M N F Y D S C P Y L K F A H F T A N Q A I L E A V T T S R V V H V I D L G L N Q G M Q W P A L M Q
pt000969_POPTR_    C L D S S Y S D T L E M H F Y E T C P Y L K F A H F T A N Q A I L E A F A N A S R V H V I D F G L K Q G M Q W P A L M Q
 
AT5G17490.1     A L A L R P G G P P S F R L T G V G - - N P S N R E G I Q E L G W K L A Q L A Q A I G V E F K F N G L T T E R L S D L E
pt000969_POPTR_    A L A L R P G G P P A F R L T G I G P P Q P D N T D A L Q Q V G W K L A Q L A Q T I G V E F E F R G F V A S S L A D L E
 
AT5G17490.1     P D M F E T R - T E S E T L V V N S V F E L H P V L S Q P G S I E K L L A T V K A V K P G L V T V V E Q E A N H N G D V
pt000969_POPTR_    A E M L D L R P P E V E A V A V N S V F E L H R L L D R P G G I D K V L G S I K A M R P K I V T I V E Q E A N H N G P V
 
AT5G17490.1     F L D R F N E A L H Y Y S S L F D S L E D G V V I P - S Q D R V M S E V Y L G R Q I L N L V A T E G S D R I E R H E T L
pt000969_POPTR_    F L D R F T E A L H Y Y S S L F D S L E G S G V T P T S Q D L V M S E L Y L G R Q I C N V V A C E G A D R V E R H E T L
 
AT5G17490.1     A Q W R K R M G S A G F D P V N L G S D A F K Q A S L L L A L S G G G D G Y R V E E N D G S L M L A W Q T K P L I A A S
pt000969_POPTR_    A Q W R T R F D S A G F D P V H L G S N A F K Q A S M L L A L F A G G D G Y R V E E N N G C L M L G W H T R P L I A T S
 
AT5G17490.1     A W K L A A E L R R - - - - - - - - - - - - -
pt000969_POPTR_    A W Q L A A G D S R L R V N S A E F E L P S Q
 
0