Input
| Putative repression domain
|
|
AT5G17810.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt013160 |
not found in 226aa |
AT3G03660.1 |
not_not |
0.403083700 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G17810.1 -MNQEGASHSPSST----STEPVRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKML
pt013160_POPTR_ MEDNQGQDHNSQSNHGTERSEPVRSRWTPKPEQILILESIFNSGMVNPPKNETVRIRKLL
:::* .*...*. :****:**:**************** *****:*******:*
AT5G17810.1 EKFGAVGDANVFYWFQNRRSRSRRRHRQLLAATTAAATSIGAEDHQHMTAMSMHQYPCSN
pt013160_POPTR_ EKFGSVGDANVFYWFQNRRSRSRRRQRQMQA-----------------------------
****:********************:**: *
AT5G17810.1 NEIDLGFGSCSNLSANYFLNGSSSSQIPSFFLGLSSSSGGCENNNGMENLFKMYGHESDH
pt013160_POPTR_ ----------SGGTSNGFANSPS-----SYLVGASSSCGVVGEDHGVESLFSF---SNQM
*. ::* * *..* *:::* ***.* :::*:*.**.: ..:
AT5G17810.1 NHQQQHHSSNAASVLNPSDQNSNSQYEQEGFMTVFINGVPMEVTKGAIDMKTMFGDDSVL
pt013160_POPTR_ GFQEFEQTSGVTSIVCPS-ETSSLHYQTAGFITIFINGVPTEVPRVPLDVKAMFGQDVML
..*: .::*..:*:: ** :.*. :*: **:*:****** **.: .:*:*:***:* :*
AT5G17810.1 LHSSGLPLPTDEFGFLMHSLQHGQTYFLVPRQT-
pt013160_POPTR_ VHSSGVPVPTNEFGFLVQILHHGESYFLVNISAV
:****:*:**:*****:: *:**::**** .:
BoxShade v3.31 C (beta, 970507) Output
AT5G17810.1 |
- |
M |
N |
Q |
E |
G |
A |
S |
H |
S |
P |
S |
S |
T |
- |
- |
- |
- |
S |
T |
E |
P |
V |
R |
A |
R |
W |
S |
P |
K |
P |
E |
Q |
I |
L |
I |
L |
E |
S |
I |
F |
N |
S |
G |
T |
V |
N |
P |
P |
K |
D |
E |
T |
V |
R |
I |
R |
K |
M |
L |
pt013160_POPTR_ |
M |
E |
D |
N |
Q |
G |
Q |
D |
H |
N |
S |
Q |
S |
N |
H |
G |
T |
E |
R |
S |
E |
P |
V |
R |
S |
R |
W |
T |
P |
K |
P |
E |
Q |
I |
L |
I |
L |
E |
S |
I |
F |
N |
S |
G |
M |
V |
N |
P |
P |
K |
N |
E |
T |
V |
R |
I |
R |
K |
L |
L |
|
AT5G17810.1 |
E |
K |
F |
G |
A |
V |
G |
D |
A |
N |
V |
F |
Y |
W |
F |
Q |
N |
R |
R |
S |
R |
S |
R |
R |
R |
H |
R |
Q |
L |
L |
A |
A |
T |
T |
A |
A |
A |
T |
S |
I |
G |
A |
E |
D |
H |
Q |
H |
M |
T |
A |
M |
S |
M |
H |
Q |
Y |
P |
C |
S |
N |
pt013160_POPTR_ |
E |
K |
F |
G |
S |
V |
G |
D |
A |
N |
V |
F |
Y |
W |
F |
Q |
N |
R |
R |
S |
R |
S |
R |
R |
R |
Q |
R |
Q |
M |
Q |
A |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT5G17810.1 |
N |
E |
I |
D |
L |
G |
F |
G |
S |
C |
S |
N |
L |
S |
A |
N |
Y |
F |
L |
N |
G |
S |
S |
S |
S |
Q |
I |
P |
S |
F |
F |
L |
G |
L |
S |
S |
S |
S |
G |
G |
C |
E |
N |
N |
N |
G |
M |
E |
N |
L |
F |
K |
M |
Y |
G |
H |
E |
S |
D |
H |
pt013160_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
G |
G |
T |
S |
N |
G |
F |
A |
N |
S |
P |
S |
- |
- |
- |
- |
- |
S |
Y |
L |
V |
G |
A |
S |
S |
S |
C |
G |
V |
V |
G |
E |
D |
H |
G |
V |
E |
S |
L |
F |
S |
F |
- |
- |
- |
S |
N |
Q |
M |
|
AT5G17810.1 |
N |
H |
Q |
Q |
Q |
H |
H |
S |
S |
N |
A |
A |
S |
V |
L |
N |
P |
S |
D |
Q |
N |
S |
N |
S |
Q |
Y |
E |
Q |
E |
G |
F |
M |
T |
V |
F |
I |
N |
G |
V |
P |
M |
E |
V |
T |
K |
G |
A |
I |
D |
M |
K |
T |
M |
F |
G |
D |
D |
S |
V |
L |
pt013160_POPTR_ |
G |
F |
Q |
E |
F |
E |
Q |
T |
S |
G |
V |
T |
S |
I |
V |
C |
P |
S |
- |
E |
T |
S |
S |
L |
H |
Y |
Q |
T |
A |
G |
F |
I |
T |
I |
F |
I |
N |
G |
V |
P |
T |
E |
V |
P |
R |
V |
P |
L |
D |
V |
K |
A |
M |
F |
G |
Q |
D |
V |
M |
L |
|
AT5G17810.1 |
L |
H |
S |
S |
G |
L |
P |
L |
P |
T |
D |
E |
F |
G |
F |
L |
M |
H |
S |
L |
Q |
H |
G |
Q |
T |
Y |
F |
L |
V |
P |
R |
Q |
T |
- |
pt013160_POPTR_ |
V |
H |
S |
S |
G |
V |
P |
V |
P |
T |
N |
E |
F |
G |
F |
L |
V |
Q |
I |
L |
H |
H |
G |
E |
S |
Y |
F |
L |
V |
N |
I |
S |
A |
V |
|
|