fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18240.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt012490 not found in 420aa AT3G04030.3 1st_not 0.537112010 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18240.3     MYYHNQHQGKSILSSSRMPISSERHPFLR-GNGTGDSGLILSTDAKPRLKWTPDLHERFV
pt012490_POPTR_ MYQHHQHQGKNIHSSSRNSIPPERHLFLQVGNGPGDSGLVLSTDAKPRLKWTPDLHERFI
                ** *:*****.* **** .*..*** **: ***.*****:*******************:

AT5G18240.3     EAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNKTSVMTM
pt012490_POPTR_ EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSGSNKSGTVAV
                ********.*******:**:************************:*****. **:..:::

AT5G18240.3     VEENPPEVDESHSESLSIGPQPSMNLPISDALQMQIEVQRRLHEQLE------LRIEAQG
pt012490_POPTR_ VGDRMPEVNATHINNLSIGSQTNKSLHFSEALQVQIEVQRRLHEQLEVQRHLQLRIEAQG
                * :. ***: :* :.****.*.. .* :*:***:*************      *******

AT5G18240.3     KYLQSILEKAQETLGRQNLGAAGIEATKAQLSELVSKVSADYPDSSFLEPKELQNLHHQQ
pt012490_POPTR_ KYLQSVLEKAQETLGRQNLGTVGLEAAKVQLSELVSKVSSKCLNSAFSELKDLQGLCPPL
                *****:**************:.*:**:*.**********:.  :*:* * *:**.*    

AT5G18240.3     MQKTYPPNSSLDSCLTSSEGTQKAPKMLDNRLGLRTYIGDSTSEQKEIMEEPFFHRMELT
pt012490_POPTR_ TQPTHPNDCSMDSCLTSIEGSQKEQEIHNTGMGLRPYNGNALLEPKVIAGEHALQQTELK
                 * *:* :.*:****** **:**  :: :. :***.* *::  * * *  *  ::: **.

AT5G18240.3     WAEEESLRENHNRPYLSTMVNNAEPRISSSRRSPGRLSIGVGLHEHRGRSSNNSEYTEER
pt012490_POPTR_ WGED----QRDNKMFLSSMRNDTDRRTFSAERSCSNLSIGVGLQGERGNVS--SSFAEAR
                *.*:    :..*: :**:* *::: *  *:.** ..*******: .**. *  *.::* *

AT5G18240.3     FNENNED-------------CKLE----------THTRTALDLNTHDENYGTTRPKQFDL
pt012490_POPTR_ FKGRSEDDSFQDKTNRRIDAIKLENEKLSPGYRLSYYATKLDLNSHGEIDAASGCRQLDL
                *: ..**              ***          ::  * ****:*.*  .::  :*:**

AT5G18240.3     NGFSWN
pt012490_POPTR_ NGFSWN
                ******
BoxShade v3.31 C (beta, 970507) Output
AT5G18240.3     M Y Y H N Q H Q G K S I L S S S R M P I S S E R H P F L R - G N G T G D S G L I L S T D A K P R L K W T P D L H E R F V
pt012490_POPTR_    M Y Q H H Q H Q G K N I H S S S R N S I P P E R H L F L Q V G N G P G D S G L V L S T D A K P R L K W T P D L H E R F I
 
AT5G18240.3     E A V N Q L G G G D K A T P K T I M K V M G I P G L T L Y H L K S H L Q K Y R L S K N L N G Q A N S S L N K T S V M T M
pt012490_POPTR_    E A V N Q L G G A D K A T P K T V M K L M G I P G L T L Y H L K S H L Q K Y R L S K N L H G Q A N S G S N K S G T V A V
 
AT5G18240.3     V E E N P P E V D E S H S E S L S I G P Q P S M N L P I S D A L Q M Q I E V Q R R L H E Q L E - - - - - - L R I E A Q G
pt012490_POPTR_    V G D R M P E V N A T H I N N L S I G S Q T N K S L H F S E A L Q V Q I E V Q R R L H E Q L E V Q R H L Q L R I E A Q G
 
AT5G18240.3     K Y L Q S I L E K A Q E T L G R Q N L G A A G I E A T K A Q L S E L V S K V S A D Y P D S S F L E P K E L Q N L H H Q Q
pt012490_POPTR_    K Y L Q S V L E K A Q E T L G R Q N L G T V G L E A A K V Q L S E L V S K V S S K C L N S A F S E L K D L Q G L C P P L
 
AT5G18240.3     M Q K T Y P P N S S L D S C L T S S E G T Q K A P K M L D N R L G L R T Y I G D S T S E Q K E I M E E P F F H R M E L T
pt012490_POPTR_    T Q P T H P N D C S M D S C L T S I E G S Q K E Q E I H N T G M G L R P Y N G N A L L E P K V I A G E H A L Q Q T E L K
 
AT5G18240.3     W A E E E S L R E N H N R P Y L S T M V N N A E P R I S S S R R S P G R L S I G V G L H E H R G R S S N N S E Y T E E R
pt012490_POPTR_    W G E D - - - - Q R D N K M F L S S M R N D T D R R T F S A E R S C S N L S I G V G L Q G E R G N V S - - S S F A E A R
 
AT5G18240.3     F N E N N E D - - - - - - - - - - - - - C K L E - - - - - - - - - - T H T R T A L D L N T H D E N Y G T T R P K Q F D L
pt012490_POPTR_    F K G R S E D D S F Q D K T N R R I D A I K L E N E K L S P G Y R L S Y Y A T K L D L N S H G E I D A A S G C R Q L D L
 
AT5G18240.3     N G F S W N
pt012490_POPTR_    N G F S W N
 
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