fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18240.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015112 not found in 427aa AT3G04030.3 not_not 0.515519568 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18240.3     MYYHNQHQGKSILSSSRMPISSERHPFLR-GNGTGDSGLILSTDAKPRLKWTPDLHERFV
pt015112_POPTR_ MYHHHQHQGKSIHSSSRMAIPPERHLFLQGGNGPGDSGLVLSTDAKPRLKWTPDLHERFI
                **:*:******* *****.*..*** **: ***.*****:*******************:

AT5G18240.3     EAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNKTSVMTM
pt015112_POPTR_ EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGSSKIGTVAV
                ********.*******:**:************************:**** . .* ..:::

AT5G18240.3     VEENPPEVDESH--SESLSIGPQP-----SMNLPISDALQMQIEVQRRLHEQLE------
pt015112_POPTR_ VGDRMPEANATHININNLSIGSQPNKILKSRSLHFSEALQMQIEVQRRLHEQLEVQRHLQ
                * :. **.: :*   :.****.**     * .* :*:*****************      

AT5G18240.3     LRIEAQGKYLQSILEKAQETLGRQNLGAAGIEATKAQLSELVSKVSADYPDSSFLEPKEL
pt015112_POPTR_ LRIEAQGKYLQAVLEKAQETLGRQNLGTVGLEAAKVQLSELVSKVSTQCLNSTFSELNDL
                ***********::**************:.*:**:*.**********::  :*:* * ::*

AT5G18240.3     QNLHHQQMQKTYPPNSSLDSCLTSSEGTQKAPKMLDNRLGLRTYIGDSTSEQKEIMEEPF
pt015112_POPTR_ QGLCPQQTPPTQPNDCSMDSCLTSCEGSQKEQEIHNIGMGLRPCNSNALLEPKEIAEEHA
                *.*  **   * * :.*:******.**:**  :: :  :***.  .::  * *** **  

AT5G18240.3     FHRMELTWAEEESLRENHNRPYLSTMVNNAEPRISSSRRSPGRLSIGVGLHEHRGRSSNN
pt015112_POPTR_ LQQTELKWG--EYLRD--NKMFLTSIGHETERRTFSAERSCSDLSIGVGLQGEKG--NIN
                ::: **.*.  * **:  *: :*::: :::* *  *:.** . *******: .:*  . *

AT5G18240.3     SEYTEERFNENNEDCKLETHTR-----------------------TALDLNTHDENYGTT
pt015112_POPTR_ SSFAEGRFKGMSEDDSFQDQTNKRAESVKFEDEKMSPGYRLSYFTTKLDLNSHDEIDAAS
                *.::* **:  .** .:: :*.                       * ****:***  .::

AT5G18240.3     RPKQFDLNGFSWN
pt015112_POPTR_ SCKQLDLNGFSWN
                  **:********
BoxShade v3.31 C (beta, 970507) Output
AT5G18240.3     M Y Y H N Q H Q G K S I L S S S R M P I S S E R H P F L R - G N G T G D S G L I L S T D A K P R L K W T P D L H E R F V
pt015112_POPTR_    M Y H H H Q H Q G K S I H S S S R M A I P P E R H L F L Q G G N G P G D S G L V L S T D A K P R L K W T P D L H E R F I
 
AT5G18240.3     E A V N Q L G G G D K A T P K T I M K V M G I P G L T L Y H L K S H L Q K Y R L S K N L N G Q A N S S L N K T S V M T M
pt015112_POPTR_    E A V N Q L G G A D K A T P K T V M K L M G I P G L T L Y H L K S H L Q K Y R L S K N L H G Q A N I G S S K I G T V A V
 
AT5G18240.3     V E E N P P E V D E S H - - S E S L S I G P Q P - - - - - S M N L P I S D A L Q M Q I E V Q R R L H E Q L E - - - - - -
pt015112_POPTR_    V G D R M P E A N A T H I N I N N L S I G S Q P N K I L K S R S L H F S E A L Q M Q I E V Q R R L H E Q L E V Q R H L Q
 
AT5G18240.3     L R I E A Q G K Y L Q S I L E K A Q E T L G R Q N L G A A G I E A T K A Q L S E L V S K V S A D Y P D S S F L E P K E L
pt015112_POPTR_    L R I E A Q G K Y L Q A V L E K A Q E T L G R Q N L G T V G L E A A K V Q L S E L V S K V S T Q C L N S T F S E L N D L
 
AT5G18240.3     Q N L H H Q Q M Q K T Y P P N S S L D S C L T S S E G T Q K A P K M L D N R L G L R T Y I G D S T S E Q K E I M E E P F
pt015112_POPTR_    Q G L C P Q Q T P P T Q P N D C S M D S C L T S C E G S Q K E Q E I H N I G M G L R P C N S N A L L E P K E I A E E H A
 
AT5G18240.3     F H R M E L T W A E E E S L R E N H N R P Y L S T M V N N A E P R I S S S R R S P G R L S I G V G L H E H R G R S S N N
pt015112_POPTR_    L Q Q T E L K W G - - E Y L R D - - N K M F L T S I G H E T E R R T F S A E R S C S D L S I G V G L Q G E K G - - N I N
 
AT5G18240.3     S E Y T E E R F N E N N E D C K L E T H T R - - - - - - - - - - - - - - - - - - - - - - - T A L D L N T H D E N Y G T T
pt015112_POPTR_    S S F A E G R F K G M S E D D S F Q D Q T N K R A E S V K F E D E K M S P G Y R L S Y F T T K L D L N S H D E I D A A S
 
AT5G18240.3     R P K Q F D L N G F S W N
pt015112_POPTR_    S C K Q L D L N G F S W N
 
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