fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18240.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034055 not found in 420aa AT3G04030.3 1st_not 0.489878542 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18240.3     MYYHNQHQGKSILSSSRMPISSERHPFLR-GNGTGDSGLILSTDAKPRLKWTPDLHERFV
gm034055_Glyma1 MYHHHQHQGKNIHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFI
                **:*:*****.* *******.**** **: ***:*****:**************** **:

AT5G18240.3     EAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNKTSVMTM
gm034055_Glyma1 EAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTYKITTSAS
                ********.*******:**:************************:**:*.   * :. : 

AT5G18240.3     VEENPPEVDESHSESLSIGPQPSMNLPISDALQMQIEVQRRLHEQLE------LRIEAQG
gm034055_Glyma1 TGERLSETNGTHMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQG
                . *. .*.: :* :.**:***.. :* **:************:****      *******

AT5G18240.3     KYLQSILEKAQETLGRQNLGAAGIEATKAQLSELVSKVSADYPDSSFLEPKELQNLHHQQ
gm034055_Glyma1 KYLQSVLEKAQETLGRQNLGVVGIEAAKVQLSELVSKVSSQCLNSAFTEPKDLQGFFPQQ
                *****:**************..****:*.**********::  :*:* ***:**.:. **

AT5G18240.3     MQKTYPPNS-SLDSCLTSSEGTQKAPKMLDNRLGLRTYIGDSTSEQKEIMEEPFFHRM-E
gm034055_Glyma1 TQ-TNPPNDCSMDSCLTSSDRSQKEQEIQN---GLRHFNSHVFMEHKEATEAPNNLRNPE
                 * * ***. *:*******: :**  :: :   *** : ..   *:**  * *   *  *

AT5G18240.3     LTWAEEESLRENHNRPYLSTMVNNAEPRISSSRRSPGRLSIGVGLHEHRGRSSNN--SEY
gm034055_Glyma1 LKWCE-----DGKKNTFLAPLSKNEERRNYAAESSPNNLSMSIGLE----RETENGINLY
                *.*.*     :.::..:*:.: :* * *  ::. **..**:.:**.    *.::*  . *

AT5G18240.3     TEERFNENNEDCKLETHTR--------------------------TALDLNTHDENYGTT
gm034055_Glyma1 PERLITESQSDGEFQHRNRIKPETLKPVDEKVSQDYRLPASYFAAARLDLNTHGDNEAAT
                .*. :.*.:.* ::: :.*                          : ******.:* .:*

AT5G18240.3     RPKQFDLNGFSWN
gm034055_Glyma1 TCKQLDLNRFSWS
                  **:*** ***.
BoxShade v3.31 C (beta, 970507) Output
AT5G18240.3     M Y Y H N Q H Q G K S I L S S S R M P I S S E R H P F L R - G N G T G D S G L I L S T D A K P R L K W T P D L H E R F V
gm034055_Glyma1    M Y H H H Q H Q G K N I H S S S R M P I P S E R H M F L Q T G N G S G D S G L V L S T D A K P R L K W T P D L H A R F I
 
AT5G18240.3     E A V N Q L G G G D K A T P K T I M K V M G I P G L T L Y H L K S H L Q K Y R L S K N L N G Q A N S S L N K T S V M T M
gm034055_Glyma1    E A V N Q L G G A D K A T P K T V M K L M G I P G L T L Y H L K S H L Q K Y R L S K N L H G Q S N N V T Y K I T T S A S
 
AT5G18240.3     V E E N P P E V D E S H S E S L S I G P Q P S M N L P I S D A L Q M Q I E V Q R R L H E Q L E - - - - - - L R I E A Q G
gm034055_Glyma1    T G E R L S E T N G T H M N K L S L G P Q A N K D L H I S E A L Q M Q I E V Q R R L N E Q L E V Q R H L Q L R I E A Q G
 
AT5G18240.3     K Y L Q S I L E K A Q E T L G R Q N L G A A G I E A T K A Q L S E L V S K V S A D Y P D S S F L E P K E L Q N L H H Q Q
gm034055_Glyma1    K Y L Q S V L E K A Q E T L G R Q N L G V V G I E A A K V Q L S E L V S K V S S Q C L N S A F T E P K D L Q G F F P Q Q
 
AT5G18240.3     M Q K T Y P P N S - S L D S C L T S S E G T Q K A P K M L D N R L G L R T Y I G D S T S E Q K E I M E E P F F H R M - E
gm034055_Glyma1    T Q - T N P P N D C S M D S C L T S S D R S Q K E Q E I Q N - - - G L R H F N S H V F M E H K E A T E A P N N L R N P E
 
AT5G18240.3     L T W A E E E S L R E N H N R P Y L S T M V N N A E P R I S S S R R S P G R L S I G V G L H E H R G R S S N N - - S E Y
gm034055_Glyma1    L K W C E - - - - - D G K K N T F L A P L S K N E E R R N Y A A E S S P N N L S M S I G L E - - - - R E T E N G I N L Y
 
AT5G18240.3     T E E R F N E N N E D C K L E T H T R - - - - - - - - - - - - - - - - - - - - - - - - - - T A L D L N T H D E N Y G T T
gm034055_Glyma1    P E R L I T E S Q S D G E F Q H R N R I K P E T L K P V D E K V S Q D Y R L P A S Y F A A A R L D L N T H G D N E A A T
 
AT5G18240.3     R P K Q F D L N G F S W N
gm034055_Glyma1    T C K Q L D L N R F S W S
 
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