fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044820 not found in 410aa AT5G18270.1 1st_1st 0.477207977 Ia
Pt014435 not found in 389aa AT5G18270.1 1st_1st 0.477207977 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G18270.1     MAVVVEEGVVLN-----HGGEELVDLPPGFRFHPTDEEIITCYLKEKVLNSRFTAVAMGE
pt014435_POPTR_ ----MEEAVVVNKG------DDQIHLPAGFRFHPTDEEIISHYLTEKVMKSGFCAIAIGE
gm044820_Glyma1 ---MMEEPVVVNKGDYDHDHDQPLDLPPGFRFHPTDEEIITCYLTEKVLNRAFSATAIGE
                    :** **:*        :: :.**.************: **.***::  * * *:**

AT5G18270.1     ADLNKCEPWDLPKRAKMGEKEFYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIFKGK
pt014435_POPTR_ VDLNKCEPWDLPKKAKMGENEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIHKEK
gm044820_Glyma1 ADFNKCEPWDLPKKAKMGEKDWYFFCQRDRKYPTGMRTNRATQSGYWKATGKDKEIFKGK
                .*:**********:*****:::********************:*************.* *

AT5G18270.1     GCLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNP
pt014435_POPTR_ NCLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLEGKFSYYSLPKVARDEWVVCRIFHKST-
gm044820_Glyma1 NNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLDGKFACYNLPKAAKDEWVVCKVFHKSST
                . ***************************:**:**:: *.*** *:******::***.. 

AT5G18270.1     STTTQPMTRIPVED--FTRMDSLENIDHLLDFSSLPPLIDP-----SFMSQTEQ------
pt014435_POPTR_ -----GMKKTSIHD--LLRMNSFG--DDFLDCSSLPPLMDPPNYTSSF-SDADN----NE
gm044820_Glyma1 TTTDVNKRVLPIINPGLLRMNSSNGEDLLFDFSSLPPLVDP-----LF-DQTSNKHIDND
                          .: :  : **:*    * ::* ******:**      * .::.:      

AT5G18270.1     -----------------------PNF-----------KPINPPTYDI-------------
pt014435_POPTR_ FKAMMTS--------RSSDGNYFSNTSMLNNNQGFV-QPPNTN-YQTPNSSFHLQ-----
gm044820_Glyma1 FKGTNNTPSSSSAKLPSSSGYYLPNFNNNNNQQMLMMKPEEHKIYEIPINNYASTSQVDF
                                       .*            :* :   *:              

AT5G18270.1     ---SSPI------------QPH---------HFNSYQ-SIFNHQ--------VFGSASGS
pt014435_POPTR_ TPASNPLYTFQTNPN----MPVYLQQGKSTNSFPNFQNSTFGNNGQTLLRALAAGNNYGE
gm044820_Glyma1 TTTNNPMGISTSNNNILLSQPQIRTQNSTSVPFNMFQ-DCYNH-----------------
                   ..*:             *           *  :* . :.:                 

AT5G18270.1     TYNNNNEMIKME---------QSLVSVSQETCLSSDVNANMTTTTEVSSGPVMKQEMGMM
pt014435_POPTR_ ASDQLGKQCKVEQFSSN----QSMVSLSQDTGLSTDVN----TTTE-ISSVVSKQE----
gm044820_Glyma1 --THQGKQCKMEQFSIDSTKKQPVVSASQDTCLSND-----------TSSVVSKQDNNM-
                   : .:  *:*         *.:** **:* **.*            *. * **:    

AT5G18270.1     GMVNGSKS-YED-----------LCDLRGDLWDF-
pt014435_POPTR_ --IGSHNEFYES-LEDP--LAGPIADY---MWDY-
gm044820_Glyma1 ---GRNKALYEDNFEGPSSVATTLSDLEC-LWDDY
                   .  :  **.           :.*    :**
BoxShade v3.31 C (beta, 970507) Output
AT5G18270.1     M A V V V E E G V V L N - - - - - H G G E E L V D L P P G F R F H P T D E E I I T C Y L K E K V L N S R F T A V A M G E
pt014435_POPTR_    - - - - M E E A V V V N K G - - - - - - D D Q I H L P A G F R F H P T D E E I I S H Y L T E K V M K S G F C A I A I G E
gm044820_Glyma1    - - - M M E E P V V V N K G D Y D H D H D Q P L D L P P G F R F H P T D E E I I T C Y L T E K V L N R A F S A T A I G E
 
AT5G18270.1     A D L N K C E P W D L P K R A K M G E K E F Y F F C Q R D R K Y P T G M R T N R A T E S G Y W K A T G K D K E I F K G K
pt014435_POPTR_    V D L N K C E P W D L P K K A K M G E N E W Y F F C Q R D R K Y P T G M R T N R A T E S G Y W K A T G K D K E I H K E K
gm044820_Glyma1    A D F N K C E P W D L P K K A K M G E K D W Y F F C Q R D R K Y P T G M R T N R A T Q S G Y W K A T G K D K E I F K G K
 
AT5G18270.1     G C L V G M K K T L V F Y R G R A P K G E K T N W V M H E Y R L E G K Y S Y Y N L P K S A R D E W V V C R V F H K N N P
pt014435_POPTR_    N C L V G M K K T L V F Y R G R A P K G E K T N W V M H E Y R L E G K F S Y Y S L P K V A R D E W V V C R I F H K S T -
gm044820_Glyma1    N N L V G M K K T L V F Y R G R A P K G E K T N W V M H E F R L D G K F A C Y N L P K A A K D E W V V C K V F H K S S T
 
AT5G18270.1     S T T T Q P M T R I P V E D - - F T R M D S L E N I D H L L D F S S L P P L I D P - - - - - S F M S Q T E Q - - - - - -
pt014435_POPTR_    - - - - - G M K K T S I H D - - L L R M N S F G - - D D F L D C S S L P P L M D P P N Y T S S F - S D A D N - - - - N E
gm044820_Glyma1    T T T D V N K R V L P I I N P G L L R M N S S N G E D L L F D F S S L P P L V D P - - - - - L F - D Q T S N K H I D N D
 
AT5G18270.1     - - - - - - - - - - - - - - - - - - - - - - - P N F - - - - - - - - - - - K P I N P P T Y D I - - - - - - - - - - - - -
pt014435_POPTR_    F K A M M T S - - - - - - - - R S S D G N Y F S N T S M L N N N Q G F V - Q P P N T N - Y Q T P N S S F H L Q - - - - -
gm044820_Glyma1    F K G T N N T P S S S S A K L P S S S G Y Y L P N F N N N N N Q Q M L M M K P E E H K I Y E I P I N N Y A S T S Q V D F
 
AT5G18270.1     - - - S S P I - - - - - - - - - - - - Q P H - - - - - - - - - H F N S Y Q - S I F N H Q - - - - - - - - V F G S A S G S
pt014435_POPTR_    T P A S N P L Y T F Q T N P N - - - - M P V Y L Q Q G K S T N S F P N F Q N S T F G N N G Q T L L R A L A A G N N Y G E
gm044820_Glyma1    T T T N N P M G I S T S N N N I L L S Q P Q I R T Q N S T S V P F N M F Q - D C Y N H - - - - - - - - - - - - - - - - -
 
AT5G18270.1     T Y N N N N E M I K M E - - - - - - - - - Q S L V S V S Q E T C L S S D V N A N M T T T T E V S S G P V M K Q E M G M M
pt014435_POPTR_    A S D Q L G K Q C K V E Q F S S N - - - - Q S M V S L S Q D T G L S T D V N - - - - T T T E - I S S V V S K Q E - - - -
gm044820_Glyma1    - - T H Q G K Q C K M E Q F S I D S T K K Q P V V S A S Q D T C L S N D - - - - - - - - - - - T S S V V S K Q D N N M -
 
AT5G18270.1     G M V N G S K S - Y E D - - - - - - - - - - - L C D L R G D L W D F -
pt014435_POPTR_    - - I G S H N E F Y E S - L E D P - - L A G P I A D Y - - - M W D Y -
gm044820_Glyma1    - - - G R N K A L Y E D N F E G P S S V A T T L S D L E C - L W D D Y
 
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