fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003286 not found in 410aa AT5G18270.1 not_1st 0.465811965 II
Gm043852 not found in 407aa AT5G18270.1 not_1st 0.457264957 II
Gm051741 not found in 308aa AT5G18270.1 not_1st 0.414529914 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G18270.1     MAVVVEEGVVLNHGGE-----ELVDLPPGFRFHPTDEEIITCYLKEKVLNSRFTAVAMGE
gm003286_Glyma0 ---MMEEPVVVNKGDDHDHDHEPLDLPPGFRFHPTDEEIITCYLTEKVLNRTFSATAIGE
gm043852_Glyma1 ----MEEPIVVNKGE------EPLDLPPGFRFHPTDEEIITYYLTEKVKNSIFSAIAIGE
gm051741_Glyma1 ----MEEPIVVNKGE------EPLDLPPGFRFHPTDEEIITYYLTEKVRNSSFSAIAIGE
                    :** :*:*:*       * :***************** **.*** *  *:* *:**

AT5G18270.1     ADLNKCEPWDLPKRAKMGEKEFYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIFKGK
gm003286_Glyma0 ADFNKCEPWDLPKKAKMGEKDWYFFCQRDRKYPTGMRTNRATQSGYWKATGKDKEIFKGK
gm043852_Glyma1 ADLNKCEPWDLPKKAKIGEKEWYFFCQKDRKYPTGMRTNRATESGYWKATGKDKEIYKGK
gm051741_Glyma1 ADLNKCEPWDLPKKAKIGEKEWYFFCQKDRKYPTGMRTNRATESGYWKATGKDKEIYKGK
                **:**********:**:***::*****:**************:*************:***

AT5G18270.1     GCLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLEGKYSYYNLPKSARDEWV----------
gm003286_Glyma0 NNLVGMKKTLVFYRGRAPKGEKSNWVMHEFRLDGKFACYNLPKASKDEWV----------
gm043852_Glyma1 GNLVGMKKTLVFYKGRAPKGEKSNWVMHEFRLEGKFASYNLPKAAKDEWV----------
gm051741_Glyma1 GNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFASYNLPKAAKKCLFCVSLGVSFMM
                . ***********:********:******:**:**:: *****:::.  .          

AT5G18270.1     --VCRVFHKNNPSTTTQPMTRIPV----EDFTRMD-SLENIDHLLDFSSLPPLIDPSF--
gm003286_Glyma0 --VCKVFHKGNTT-TTDVVNKRALPIINPCLLRMNSSIG--EDLFDFSSLPPLVDPLF--
gm043852_Glyma1 --VSRVFHKNTD------VKKSSI----PGLLRIN-SIG--DDLLDYSSLPSLMDPPYGN
gm051741_Glyma1 NGLSQGFFTRTQ------MSKIS---------------------------PS--------
                  :.: *.. .       :.: .                           *.        

AT5G18270.1     -MSQTEQ----------------------------PNF--------------KPI---NP
gm003286_Glyma0 --DQTSNKHIDNDFKGTNNTPSSSSAKPPSSGYYLPNF-INNNNNQHMLMMMKPE---EH
gm043852_Glyma1 NTNTTNNNN-------NNANPLSSTKLSQSEGYYLPSFSINNNHHQ---LLIKPEDHHNH
gm051741_Glyma1 --TTTSSSF-------SSSQKITTT---------------------------------TE
                    *..                                                     

AT5G18270.1     PTYDIS-----------------SPI------------------------QPHHFNSYQ-
gm003286_Glyma0 KMYEIPTNNYASTSQVNFTTTN-NPIMGISTGNNNTLLSQPQIRTQNSTSVP--FNMFQ-
gm043852_Glyma1 RIYEFPTINF-TSNQTNLSSNNVNPM-----GNNNTL-----------SSQP--LNMFSA
gm051741_Glyma1 AIMRFPQL---TTPQT----------------------------------KP--ISATT-
                    :.                                             *  :.    

AT5G18270.1     SIFNHQ----------VFGSA--------------SGSTYNNNNEMIKMEQ-------SL
gm003286_Glyma0 DYYNYM-----------------------------------NQGKQCKMEQFSNTKNQPV
gm043852_Glyma1 DYYVHQNRIKSSIMPSVAGSGFVSDNNNHDEAILRAFAAKNNEHIQCKMEQFSSNH----
gm051741_Glyma1 -----------------------------------AFAAKNNEHIQCKMEQFSSNH----
                                                         *:    ****         

AT5G18270.1     VSVSQETCLSSDVNANMTTTTEVSSGPVMKQEMGMMGMVNGSKS-YED-----------L
gm003286_Glyma0 VSASQDTCLSN-------DTSSVVS----K-QDNNIGR---NKALYEDNFEAPSSVATTL
gm043852_Glyma1 ---SQDTGLSND--RNTTDTSSVVS----------MGRNNNNRALYED-LEGPSSVA-PL
gm051741_Glyma1 ---SQDTGLSND--RNTTDTSSVVS----KQQDNNMGR-NNNRALYED-LEGPSSVA-PL
                   **:* **.        *:.* *          :*    .:: ***           *

AT5G18270.1     CDLRGDLW--DF
gm003286_Glyma0 SDLECL-W-DDY
gm043852_Glyma1 SDLECLQWDDDY
gm051741_Glyma1 SDLECLQWDDDY
                .**.   *  *:
BoxShade v3.31 C (beta, 970507) Output
AT5G18270.1     M A V V V E E G V V L N H G G E - - - - - E L V D L P P G F R F H P T D E E I I T C Y L K E K V L N S R F T A V A M G E
gm003286_Glyma0    - - - M M E E P V V V N K G D D H D H D H E P L D L P P G F R F H P T D E E I I T C Y L T E K V L N R T F S A T A I G E
gm043852_Glyma1    - - - - M E E P I V V N K G E - - - - - - E P L D L P P G F R F H P T D E E I I T Y Y L T E K V K N S I F S A I A I G E
gm051741_Glyma1    - - - - M E E P I V V N K G E - - - - - - E P L D L P P G F R F H P T D E E I I T Y Y L T E K V R N S S F S A I A I G E
 
AT5G18270.1     A D L N K C E P W D L P K R A K M G E K E F Y F F C Q R D R K Y P T G M R T N R A T E S G Y W K A T G K D K E I F K G K
gm003286_Glyma0    A D F N K C E P W D L P K K A K M G E K D W Y F F C Q R D R K Y P T G M R T N R A T Q S G Y W K A T G K D K E I F K G K
gm043852_Glyma1    A D L N K C E P W D L P K K A K I G E K E W Y F F C Q K D R K Y P T G M R T N R A T E S G Y W K A T G K D K E I Y K G K
gm051741_Glyma1    A D L N K C E P W D L P K K A K I G E K E W Y F F C Q K D R K Y P T G M R T N R A T E S G Y W K A T G K D K E I Y K G K
 
AT5G18270.1     G C L V G M K K T L V F Y R G R A P K G E K T N W V M H E Y R L E G K Y S Y Y N L P K S A R D E W V - - - - - - - - - -
gm003286_Glyma0    N N L V G M K K T L V F Y R G R A P K G E K S N W V M H E F R L D G K F A C Y N L P K A S K D E W V - - - - - - - - - -
gm043852_Glyma1    G N L V G M K K T L V F Y K G R A P K G E K S N W V M H E F R L E G K F A S Y N L P K A A K D E W V - - - - - - - - - -
gm051741_Glyma1    G N L V G M K K T L V F Y R G R A P K G E K T N W V M H E F R L E G K F A S Y N L P K A A K K C L F C V S L G V S F M M
 
AT5G18270.1     - - V C R V F H K N N P S T T T Q P M T R I P V - - - - E D F T R M D - S L E N I D H L L D F S S L P P L I D P S F - -
gm003286_Glyma0    - - V C K V F H K G N T T - T T D V V N K R A L P I I N P C L L R M N S S I G - - E D L F D F S S L P P L V D P L F - -
gm043852_Glyma1    - - V S R V F H K N T D - - - - - - V K K S S I - - - - P G L L R I N - S I G - - D D L L D Y S S L P S L M D P P Y G N
gm051741_Glyma1    N G L S Q G F F T R T Q - - - - - - M S K I S - - - - - - - - - - - - - - - - - - - - - - - - - - - P S - - - - - - - -
 
AT5G18270.1     - M S Q T E Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - P N F - - - - - - - - - - - - - - K P I - - - N P
gm003286_Glyma0    - - D Q T S N K H I D N D F K G T N N T P S S S S A K P P S S G Y Y L P N F - I N N N N N Q H M L M M M K P E - - - E H
gm043852_Glyma1    N T N T T N N N N - - - - - - - N N A N P L S S T K L S Q S E G Y Y L P S F S I N N N H H Q - - - L L I K P E D H H N H
gm051741_Glyma1    - - T T T S S S F - - - - - - - S S S Q K I T T T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T E
 
AT5G18270.1     P T Y D I S - - - - - - - - - - - - - - - - - S P I - - - - - - - - - - - - - - - - - - - - - - - - Q P H H F N S Y Q -
gm003286_Glyma0    K M Y E I P T N N Y A S T S Q V N F T T T N - N P I M G I S T G N N N T L L S Q P Q I R T Q N S T S V P - - F N M F Q -
gm043852_Glyma1    R I Y E F P T I N F - T S N Q T N L S S N N V N P M - - - - - G N N N T L - - - - - - - - - - - S S Q P - - L N M F S A
gm051741_Glyma1    A I M R F P Q L - - - T T P Q T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K P - - I S A T T -
 
AT5G18270.1     S I F N H Q - - - - - - - - - - V F G S A - - - - - - - - - - - - - - S G S T Y N N N N E M I K M E Q - - - - - - - S L
gm003286_Glyma0    D Y Y N Y M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N Q G K Q C K M E Q F S N T K N Q P V
gm043852_Glyma1    D Y Y V H Q N R I K S S I M P S V A G S G F V S D N N N H D E A I L R A F A A K N N E H I Q C K M E Q F S S N H - - - -
gm051741_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A F A A K N N E H I Q C K M E Q F S S N H - - - -
 
AT5G18270.1     V S V S Q E T C L S S D V N A N M T T T T E V S S G P V M K Q E M G M M G M V N G S K S - Y E D - - - - - - - - - - - L
gm003286_Glyma0    V S A S Q D T C L S N - - - - - - - D T S S V V S - - - - K - Q D N N I G R - - - N K A L Y E D N F E A P S S V A T T L
gm043852_Glyma1    - - - S Q D T G L S N D - - R N T T D T S S V V S - - - - - - - - - - M G R N N N N R A L Y E D - L E G P S S V A - P L
gm051741_Glyma1    - - - S Q D T G L S N D - - R N T T D T S S V V S - - - - K Q Q D N N M G R - N N N R A L Y E D - L E G P S S V A - P L
 
AT5G18270.1     C D L R G D L W - - D F
gm003286_Glyma0    S D L E C L - W - D D Y
gm043852_Glyma1    S D L E C L Q W D D D Y
gm051741_Glyma1    S D L E C L Q W D D D Y
 
0