fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044820 not found in 410aa AT5G18270.1 1st_1st 0.477207977 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18270.1     MAVVVEEGVVLN-----HGGEELVDLPPGFRFHPTDEEIITCYLKEKVLNSRFTAVAMGE
gm044820_Glyma1 ---MMEEPVVVNKGDYDHDHDQPLDLPPGFRFHPTDEEIITCYLTEKVLNRAFSATAIGE
                   ::** **:*     *. :: :********************.*****  *:*.*:**

AT5G18270.1     ADLNKCEPWDLPKRAKMGEKEFYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIFKGK
gm044820_Glyma1 ADFNKCEPWDLPKKAKMGEKDWYFFCQRDRKYPTGMRTNRATQSGYWKATGKDKEIFKGK
                **:**********:******::********************:*****************

AT5G18270.1     GCLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNP
gm044820_Glyma1 NNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLDGKFACYNLPKAAKDEWVVCKVFHKSST
                . ***************************:**:**:: *****:*:******:****...

AT5G18270.1     STTTQPMTRIPVED--FTRMDSLENIDHLLDFSSLPPLIDPSFMSQTEQ-----------
gm044820_Glyma1 TTTDVNKRVLPIINPGLLRMNSSNGEDLLFDFSSLPPLVDPLF-DQTSNKHIDNDFKGTN
                :**      :*: :  : **:* :. * *:********:** * .**.:           

AT5G18270.1     ------------------PNF-----------KPINPPTYDI----------------SS
gm044820_Glyma1 NTPSSSSAKLPSSSGYYLPNFNNNNNQQMLMMKPEEHKIYEIPINNYASTSQVDFTTTNN
                                  ***           ** :   *:*                ..

AT5G18270.1     PI------------QPH---------HFNSYQSIFNHQVFGSASGSTYNNNNEMIKME--
gm044820_Glyma1 PMGISTSNNNILLSQPQIRTQNSTSVPFNMFQDCYNH-----------THQGKQCKMEQF
                *:            **:          ** :*. :**           .::.:  ***  

AT5G18270.1     -------QSLVSVSQETCLSSDVNANMTTTTEVSSGPVMKQEMGMMGMVNGSKS-YED--
gm044820_Glyma1 SIDSTKKQPVVSASQDTCLSND-----------TSSVVSKQDNNM----GRNKALYEDNF
                       *.:**.**:****.*           :*. * **: .*    . .*: ***  

AT5G18270.1     ---------LCDLRGDLWDF-
gm044820_Glyma1 EGPSSVATTLSDLEC-LWDDY
                         *.**.  ***
BoxShade v3.31 C (beta, 970507) Output
AT5G18270.1     M A V V V E E G V V L N - - - - - H G G E E L V D L P P G F R F H P T D E E I I T C Y L K E K V L N S R F T A V A M G E
gm044820_Glyma1    - - - M M E E P V V V N K G D Y D H D H D Q P L D L P P G F R F H P T D E E I I T C Y L T E K V L N R A F S A T A I G E
 
AT5G18270.1     A D L N K C E P W D L P K R A K M G E K E F Y F F C Q R D R K Y P T G M R T N R A T E S G Y W K A T G K D K E I F K G K
gm044820_Glyma1    A D F N K C E P W D L P K K A K M G E K D W Y F F C Q R D R K Y P T G M R T N R A T Q S G Y W K A T G K D K E I F K G K
 
AT5G18270.1     G C L V G M K K T L V F Y R G R A P K G E K T N W V M H E Y R L E G K Y S Y Y N L P K S A R D E W V V C R V F H K N N P
gm044820_Glyma1    N N L V G M K K T L V F Y R G R A P K G E K T N W V M H E F R L D G K F A C Y N L P K A A K D E W V V C K V F H K S S T
 
AT5G18270.1     S T T T Q P M T R I P V E D - - F T R M D S L E N I D H L L D F S S L P P L I D P S F M S Q T E Q - - - - - - - - - - -
gm044820_Glyma1    T T T D V N K R V L P I I N P G L L R M N S S N G E D L L F D F S S L P P L V D P L F - D Q T S N K H I D N D F K G T N
 
AT5G18270.1     - - - - - - - - - - - - - - - - - - P N F - - - - - - - - - - - K P I N P P T Y D I - - - - - - - - - - - - - - - - S S
gm044820_Glyma1    N T P S S S S A K L P S S S G Y Y L P N F N N N N N Q Q M L M M K P E E H K I Y E I P I N N Y A S T S Q V D F T T T N N
 
AT5G18270.1     P I - - - - - - - - - - - - Q P H - - - - - - - - - H F N S Y Q S I F N H Q V F G S A S G S T Y N N N N E M I K M E - -
gm044820_Glyma1    P M G I S T S N N N I L L S Q P Q I R T Q N S T S V P F N M F Q D C Y N H - - - - - - - - - - - T H Q G K Q C K M E Q F
 
AT5G18270.1     - - - - - - - Q S L V S V S Q E T C L S S D V N A N M T T T T E V S S G P V M K Q E M G M M G M V N G S K S - Y E D - -
gm044820_Glyma1    S I D S T K K Q P V V S A S Q D T C L S N D - - - - - - - - - - - T S S V V S K Q D N N M - - - - G R N K A L Y E D N F
 
AT5G18270.1     - - - - - - - - - L C D L R G D L W D F -
gm044820_Glyma1    E G P S S V A T T L S D L E C - L W D D Y
 
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