fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18450.1 LDMVHGLDLGLGQASC at 124/307 in AT5G18450.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os032620 not found in 230aa AT5G18450.1 1st_1st 0.259187620 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18450.1     ----------------MEEEQ--PPAKKRN---MGRSRKGCMKGKGGPENATCTFRGVRQ
Os032620_Os08t0 MEMDIGEGESCCGRRKQQQQQNISSSKSRKCCPLRRSRKGCMKGKGGPENQRCPFRGVRQ
                                 :::*  ..:*.*:   : ***************  *.******

AT5G18450.1     RTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDEAAKKLYGHEAKLNLVHPQQQQQVV
Os032620_Os08t0 RTWGKWVAEIREPNRGARLWLGTFNTALDAARAYDSAARALYGDCARLNLL---------
                ****************:*********:::** ***.**: ***. *:***:         

AT5G18450.1     VNRNLSFSGHGSGSWAYNKKLDMVHGLDLGLGQASCSRGSCSERSS----------FLQE
Os032620_Os08t0 ----LAAATAGAPPAAATPSV-----------ATPCSTNDDSNNSSSTTHQQQLTTMLQL
                    *: :  *: . * . .:            :.** .. *:.**          :** 

AT5G18450.1     DDDHSHNRCSSSSGSNLCWLLPKQSDSQDQET----VNATTSYGGEG-----------GG
Os032620_Os08t0 DDDNYT-------------LQPSSSDQEDFETYVTRLPKAEDFGLEGFQEVPLDVLDEAG
                ***:               * *..**.:* **    :  : .:* **           .*

AT5G18450.1     GSTLTFSTNLKPKNLMSQNYGLYNGAWSRFLVGQEKKTEHDVSSSCGSSDNKESMLVPSC
Os032620_Os08t0 GGISIWDLSICPADFM---------------------------ATAATTTAKSS------
                *.   :. .: * ::*                           ::..::  *.*      

AT5G18450.1     GGERMHRPELEERTGYLEMDDLLEIDDLGLLIGKNGDFKNWCCEEFQHPWNWF
Os032620_Os08t0 -----------------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT5G18450.1     - - - - - - - - - - - - - - - - M E E E Q - - P P A K K R N - - - M G R S R K G C M K G K G G P E N A T C T F R G V R Q
Os032620_Os08t0    M E M D I G E G E S C C G R R K Q Q Q Q Q N I S S S K S R K C C P L R R S R K G C M K G K G G P E N Q R C P F R G V R Q
 
AT5G18450.1     R T W G K W V A E I R E P N R G T R L W L G T F N T S V E A A M A Y D E A A K K L Y G H E A K L N L V H P Q Q Q Q Q V V
Os032620_Os08t0    R T W G K W V A E I R E P N R G A R L W L G T F N T A L D A A R A Y D S A A R A L Y G D C A R L N L L - - - - - - - - -
 
AT5G18450.1     V N R N L S F S G H G S G S W A Y N K K L D M V H G L D L G L G Q A S C S R G S C S E R S S - - - - - - - - - - F L Q E
Os032620_Os08t0    - - - - L A A A T A G A P P A A A T P S V - - - - - - - - - - - A T P C S T N D D S N N S S S T T H Q Q Q L T T M L Q L
 
AT5G18450.1     D D D H S H N R C S S S S G S N L C W L L P K Q S D S Q D Q E T - - - - V N A T T S Y G G E G - - - - - - - - - - - G G
Os032620_Os08t0    D D D N Y T - - - - - - - - - - - - - L Q P S S S D Q E D F E T Y V T R L P K A E D F G L E G F Q E V P L D V L D E A G
 
AT5G18450.1     G S T L T F S T N L K P K N L M S Q N Y G L Y N G A W S R F L V G Q E K K T E H D V S S S C G S S D N K E S M L V P S C
Os032620_Os08t0    G G I S I W D L S I C P A D F M - - - - - - - - - - - - - - - - - - - - - - - - - - - A T A A T T T A K S S - - - - - -
 
AT5G18450.1     G G E R M H R P E L E E R T G Y L E M D D L L E I D D L G L L I G K N G D F K N W C C E E F Q H P W N W F
Os032620_Os08t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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