fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033479 not found in 456aa AT3G06410.1 1st_not 0.596754057 II
Pt041225 not found in 477aa AT3G06410.1 not_not 0.579275905 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G18550.1     MERYGGAGEDESRSDPSHEWSAQGTETGIEASMWRLGLRGGGGGGET---FPERPDEPDC
pt033479_POPTR_ MDRY-GRGQEGSQSDPAQEWTGSGQETGLEEGVWQLEI------GETESEYPERPNEQDC
pt041225_POPTR_ MDRY-SRGQEGSQSDPALEWTGSGPETGLEEGVWQLGL------GETESEYPERSNEQDC
                *:** . *:: *:***: **:..* ***:* .:*:* :      ***   :***.:* **

AT5G18550.1     IYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGAS
pt033479_POPTR_ MYYLRTGFCGYGARCRYNHPRDRTAVLGAARAGGGEFPERVGQPLCQYYMRTGTCKFGAS
pt041225_POPTR_ MYYLRTGFCGYGARCRYNHPRDRNAVLGAARAGGAEYPERAGQPLCQYYMRTGTCKFGAS
                :******.****:***:****:* .***. *: ..*:*** ***:**::***********

AT5G18550.1     CKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQ
pt033479_POPTR_ CKYNHPKQGGS--SVRPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKFHHPQPANMQ
pt041225_POPTR_ CKYHHPKQGGG--SASPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKFHHPQPGNIQ
                ***:**:***.  *. ****** *:******:**:*:::*******:**::*** * .:*

AT5G18550.1     APSQQQQQQLSA--GPTMYPSLQSQTVPSSQQYGVVLARPQLLPGSYVQSPYGYGQMVLP
pt033479_POPTR_ IPAQSLAPQVASVPAHTLYPTMQSPSVPSSQQYGVMVARPPLLPGSYVQGP--YGPVLLS
pt041225_POPTR_ IPAQSLAPQIAPVPGPTLYPSVQSPSVPSSQQYGVMVARPPLLPGSYVQGP--YGPVLLS
                 *:*.   *::.  . *:**::** :*********::*** ********.*  ** ::*.

AT5G18550.1     PGMVPYSGWNPYQASVSAMPSPGTQPSMGTSSVYGITPLSPSAPAY----QSGPSSTGVS
pt033479_POPTR_ PSLVPYPSWSPYPAPVSPVASPNAQPAVGSGSVYGISPLSPSAPAYTGAYQSIPTAKGPS
pt041225_POPTR_ PSVVPYPSWNPYPAPVSPVASPNTQPAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPS
                *.:***..*.** *.**.:.**.:**::*:.****::.********    ** *.:.* *

AT5G18550.1     N---KEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEAS-TLSHIGLPLRPG
pt033479_POPTR_ SSSQKEHVFPERPGQPECQYYMKTGDCKFESSCRYHHPPELVTSKTNVVLSPMGLPLRPG
pt041225_POPTR_ SSTQKEHLFPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPG
                .   **: **:** ******:::****** :***:*** * . .::. .** :*******

AT5G18550.1     AVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYP--SSLGTLAP-S
pt033479_POPTR_ APTCTHYTQHGQCKFGPACKFDHPMG--TLSYSPSASSLADMPVAPYPVGSSIGTLAPSS
pt041225_POPTR_ APTCSHYTQRGQCKFGPACKFDHPMG--TLSYSPSASSLADMPVAPYLVGSSIGTLAPSS
                * .*:*::*:* ***********.:*  :******.***:*******   **:***** *

AT5G18550.1     SSSDQCTELISSSSIEPITTTTGGSETVAAGVSSMTSDVSHPEPA---ETNKGDSASNEA
pt033479_POPTR_ SSSDMRSK----PSKDSSSTRLSSSTSTPSG--SVGSKYSKSGPASHSSVQK----SGP-
pt041225_POPTR_ SSSDLRSKPISGPSKDSSSTRL--STSTPSG--SVGSIFSKSGPAPHLNVQQSGWSSGPS
                ****  ::    .* :. :*    * :..:*  *: *  *:. **   ..::    *.  

AT5G18550.1     KTSS----------
pt033479_POPTR_ --------------
pt041225_POPTR_ TTSSSSSSGTRTSI
BoxShade v3.31 C (beta, 970507) Output
AT5G18550.1     M E R Y G G A G E D E S R S D P S H E W S A Q G T E T G I E A S M W R L G L R G G G G G G E T - - - F P E R P D E P D C
pt033479_POPTR_    M D R Y - G R G Q E G S Q S D P A Q E W T G S G Q E T G L E E G V W Q L E I - - - - - - G E T E S E Y P E R P N E Q D C
pt041225_POPTR_    M D R Y - S R G Q E G S Q S D P A L E W T G S G P E T G L E E G V W Q L G L - - - - - - G E T E S E Y P E R S N E Q D C
 
AT5G18550.1     I Y Y L R T G V C G Y G S R C R F N H P R N R A P V L G G L R T E A G E F P E R M G Q P V C Q H F M R T G T C K F G A S
pt033479_POPTR_    M Y Y L R T G F C G Y G A R C R Y N H P R D R T A V L G A A R A G G G E F P E R V G Q P L C Q Y Y M R T G T C K F G A S
pt041225_POPTR_    M Y Y L R T G F C G Y G A R C R Y N H P R D R N A V L G A A R A G G A E Y P E R A G Q P L C Q Y Y M R T G T C K F G A S
 
AT5G18550.1     C K Y H H P R Q G G G G D S V T P V S L N Y M G F P L R P G E K E C S Y F M R T G Q C K F G S T C R Y H H P V P P G V Q
pt033479_POPTR_    C K Y N H P K Q G G S - - S V R P V S L N Y Y G Y P L R P G E R E C T Y Y I K T G Q C K F G A T C K F H H P Q P A N M Q
pt041225_POPTR_    C K Y H H P K Q G G G - - S A S P V S L N Y Y G Y P L R P G E R E C T Y Y I K T G Q C K F G A T C K F H H P Q P G N I Q
 
AT5G18550.1     A P S Q Q Q Q Q Q L S A - - G P T M Y P S L Q S Q T V P S S Q Q Y G V V L A R P Q L L P G S Y V Q S P Y G Y G Q M V L P
pt033479_POPTR_    I P A Q S L A P Q V A S V P A H T L Y P T M Q S P S V P S S Q Q Y G V M V A R P P L L P G S Y V Q G P - - Y G P V L L S
pt041225_POPTR_    I P A Q S L A P Q I A P V P G P T L Y P S V Q S P S V P S S Q Q Y G V M V A R P P L L P G S Y V Q G P - - Y G P V L L S
 
AT5G18550.1     P G M V P Y S G W N P Y Q A S V S A M P S P G T Q P S M G T S S V Y G I T P L S P S A P A Y - - - - Q S G P S S T G V S
pt033479_POPTR_    P S L V P Y P S W S P Y P A P V S P V A S P N A Q P A V G S G S V Y G I S P L S P S A P A Y T G A Y Q S I P T A K G P S
pt041225_POPTR_    P S V V P Y P S W N P Y P A P V S P V A S P N T Q P A V G S G S V Y G M S A L S P S A P A Y T G A F Q S I P P A T G P S
 
AT5G18550.1     N - - - K E Q T F P Q R P E Q P E C Q Y F M R T G D C K F G T S C R F H H P M E A A S P E A S - T L S H I G L P L R P G
pt033479_POPTR_    S S S Q K E H V F P E R P G Q P E C Q Y Y M K T G D C K F E S S C R Y H H P P E L V T S K T N V V L S P M G L P L R P G
pt041225_POPTR_    S S T Q K E H L F P E R P G Q P E C Q Y Y I K T G D C K F R S S C R Y H H P P E L V V S K S N V V L S P I G L P L R P G
 
AT5G18550.1     A V P C T H F A Q H G I C K F G P A C K F D H S L G S S S L S Y S P S P S S L T D M P V A P Y P - - S S L G T L A P - S
pt033479_POPTR_    A P T C T H Y T Q H G Q C K F G P A C K F D H P M G - - T L S Y S P S A S S L A D M P V A P Y P V G S S I G T L A P S S
pt041225_POPTR_    A P T C S H Y T Q R G Q C K F G P A C K F D H P M G - - T L S Y S P S A S S L A D M P V A P Y L V G S S I G T L A P S S
 
AT5G18550.1     S S S D Q C T E L I S S S S I E P I T T T T G G S E T V A A G V S S M T S D V S H P E P A - - - E T N K G D S A S N E A
pt033479_POPTR_    S S S D M R S K - - - - P S K D S S S T R L S S S T S T P S G - - S V G S K Y S K S G P A S H S S V Q K - - - - S G P -
pt041225_POPTR_    S S S D L R S K P I S G P S K D S S S T R L - - S T S T P S G - - S V G S I F S K S G P A P H L N V Q Q S G W S S G P S
 
AT5G18550.1     K T S S - - - - - - - - - -
pt033479_POPTR_    - - - - - - - - - - - - - -
pt041225_POPTR_    T T S S S S S S G T R T S I
 
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