fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os001337 not found in 476aa AT2G47850.3 1st_not 0.434456928 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18550.1     MER------YGGAGEDESRSDPSHEWSAQGTETGIEASMWRLGLRGGGGGG---------
Os001337_Os01t0 MEQPHAAAAAAGGGEGEGGASP---------DTGLEGPMWRMGLGGGGGGGGGGGGGDGD
                **:       .*.**.*. :.*         :**:*..***:** ******         

AT5G18550.1     --ETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVL--GGLRTEAG-EFPERMGQ
Os001337_Os01t0 AAGRLPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQ
                    :****.* **:******.**:*.***:****:*. .   ** *. *. ::*** **

AT5G18550.1     PVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQC
Os001337_Os01t0 PICEYYMKTGTCKFGTNCKYHHPKQDG---AVLPVMLNNSGFPIRLGEKECSYYMKTGQC
                *:*:::*:*******:.******:*.*   :* ** **  ***:* *******:*:****

AT5G18550.1     KFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQSQTVPSSQQYGVV----LARPQ
Os001337_Os01t0 KFGTTCKFHHPEFGGVPMT-----------PGIYPPLQSPSIASPHPYASLANWQMGRPP
                ***:**::***   **  .           * :**.*** ::.*.: *. :    :.** 

AT5G18550.1     LLPGSYVQSPYGYGQMVLPPGMVPYSGWNPYQASVSAMPSPGTQPSMGTSSVYGITPLSP
Os001337_Os01t0 VVPGSYI--PGSYTPMMLSSGMIPLQGWSPYPASVNPVVSGGAQQNVQAGPVYGMGHHGS
                ::****:  * .*  *:*..**:* .**.** ***..: * *:* .: :..***:   ..

AT5G18550.1     SAPAYQSGP-----SSTGVSN---KEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPME
Os001337_Os01t0 SSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRE
                *:.   .**     **** *.   :*: **:** **:***:*********::*::*** *

AT5G18550.1     AASPEASTL-SHIGLPLRPGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLT
Os001337_Os01t0 LSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPMG--TLGYSPSALPLS
                 ::*::. : . : ******* **:::**:* *::* ***:**.:*  :*.****. .*:

AT5G18550.1     DMPVAPYPS--SLGTLAPSS-SSDQCTELISS--SSIEPITTTTGGSETVAA----GVSS
Os001337_Os01t0 DMPIAPYPIGFSIATLAPSSPSPDLRPEYISTKDQSVNQVTSPVAASEPVGSILPKGV--
                ***:****   *:.****** *.*  .* **:  .*:: :*:....**.*.:    **  

AT5G18550.1     MTSDVSHPEPAETNKGDSASNEAKTSS
Os001337_Os01t0 FPADTMMRAQTNTTSGGSSSPGGGR--
                :.:*.     ::*..*.*:*  .
BoxShade v3.31 C (beta, 970507) Output
AT5G18550.1     M E R - - - - - - Y G G A G E D E S R S D P S H E W S A Q G T E T G I E A S M W R L G L R G G G G G G - - - - - - - - -
Os001337_Os01t0    M E Q P H A A A A A A G G G E G E G G A S P - - - - - - - - - D T G L E G P M W R M G L G G G G G G G G G G G G G D G D
 
AT5G18550.1     - - E T F P E R P D E P D C I Y Y L R T G V C G Y G S R C R F N H P R N R A P V L - - G G L R T E A G - E F P E R M G Q
Os001337_Os01t0    A A G R L P E R P G E E D C V Y Y L R T G A C G F G D R C R Y N H P R D R G G T E F G G G A R N A A A L D Y P E R A G Q
 
AT5G18550.1     P V C Q H F M R T G T C K F G A S C K Y H H P R Q G G G G D S V T P V S L N Y M G F P L R P G E K E C S Y F M R T G Q C
Os001337_Os01t0    P I C E Y Y M K T G T C K F G T N C K Y H H P K Q D G - - - A V L P V M L N N S G F P I R L G E K E C S Y Y M K T G Q C
 
AT5G18550.1     K F G S T C R Y H H P V P P G V Q A P S Q Q Q Q Q Q L S A G P T M Y P S L Q S Q T V P S S Q Q Y G V V - - - - L A R P Q
Os001337_Os01t0    K F G T T C K F H H P E F G G V P M T - - - - - - - - - - - P G I Y P P L Q S P S I A S P H P Y A S L A N W Q M G R P P
 
AT5G18550.1     L L P G S Y V Q S P Y G Y G Q M V L P P G M V P Y S G W N P Y Q A S V S A M P S P G T Q P S M G T S S V Y G I T P L S P
Os001337_Os01t0    V V P G S Y I - - P G S Y T P M M L S S G M I P L Q G W S P Y P A S V N P V V S G G A Q Q N V Q A G P V Y G M G H H G S
 
AT5G18550.1     S A P A Y Q S G P - - - - - S S T G V S N - - - K E Q T F P Q R P E Q P E C Q Y F M R T G D C K F G T S C R F H H P M E
Os001337_Os01t0    S S T I A Y G G P Y V P Y A S S T G Q S S N N Q Q E H G F P E R P G Q P D C Q Y Y M R T G D C K F G A T C K Y H H P R E
 
AT5G18550.1     A A S P E A S T L - S H I G L P L R P G A V P C T H F A Q H G I C K F G P A C K F D H S L G S S S L S Y S P S P S S L T
Os001337_Os01t0    L S A P K S G Y M V N S L C L P L R P G A Q P C A Y Y A Q N G Y C R Y G V A C K Y D H P M G - - T L G Y S P S A L P L S
 
AT5G18550.1     D M P V A P Y P S - - S L G T L A P S S - S S D Q C T E L I S S - - S S I E P I T T T T G G S E T V A A - - - - G V S S
Os001337_Os01t0    D M P I A P Y P I G F S I A T L A P S S P S P D L R P E Y I S T K D Q S V N Q V T S P V A A S E P V G S I L P K G V - -
 
AT5G18550.1     M T S D V S H P E P A E T N K G D S A S N E A K T S S
Os001337_Os01t0    F P A D T M M R A Q T N T T S G G S S S P G G G R - -
 
0