fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024977 GLEGPMLRLGLDGGGE in 41/646 AT2G47850.3 1st_not 0.426966292 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18550.1     MERYGGAGEDESRSDPSHEWSAQGTE---------TGIEASMWRLGLRGGG--------G
Sb024977_Sorbi1 MEP-PHAAEEAAAAAAAAGAGGGGGEGGGGGASPGTGLEGPMLRLGLDGGGEEGEDGELG
                **    *.*: : : .:   .. * *         **:*..* **** ***        *

AT5G18550.1     GGET----FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVL--GGLRTEAGE-FPE
Sb024977_Sorbi1 AGEEADARLPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQDFPE
                .**     :****.*.** ******.**:*.***:****:*. .   ** :. *.: ***

AT5G18550.1     RMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMR
Sb024977_Sorbi1 RQGQPVCEYYLKTGTCKFGSNCKYHHPKQDG---SVQSVILNNNGFPLRPGEKECSYYMK
                * *****:::::*******:.******:*.*   ** .* **  *************:*:

AT5G18550.1     TGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQSQTVPSSQQYGV--VLAR
Sb024977_Sorbi1 TGQCKFGSTCKFHHPEFGGIPVT-----------PGIYPPLQSASVPSPHTYAPNWQMGR
                **********::***   *: ..           * :**.*** :***.: *.    :.*

AT5G18550.1     PQLLPGSYVQSPYGYGQMVLPPGMVPYSGWNPYQASVSAMPSPGTQPSMGTSSVYGITPL
Sb024977_Sorbi1 SPAVPGSYI--PGSYTPMMLSSGMVPLQGWSPYPASVTPVASGGAQQTVQAGPLYGIGHH
                .  :****:  * .*  *:*..**** .**.** ***:.:.* *:* :: :..:***   

AT5G18550.1     -SPSAPAYQSG----PSSTGVSN---KEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHP
Sb024977_Sorbi1 GSSTAIAYGGTYLPYSSSTGQSSNNHQEHGFPERPGQPECQYFMRTGDCKFGNTCKYNHP
                 *.:* ** .     .**** *.   :*: **:** ****************.:*:::**

AT5G18550.1     MEAASPEASTL-SHIGLPLRPGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPSS
Sb024977_Sorbi1 RDWSAPKSNYMFSHLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPMG--TLGYSSSALP
                 : ::*::. : **: ******* **:::**:* *::* ***:**.:*  :*.**.*. .

AT5G18550.1     LTDMPVAPYPS--SLGTLAPSSSSDQCTELISSS--SIEPITTTTGGSETVAA----GVS
Sb024977_Sorbi1 LSDMSIAPYPIGFSVATLAPSSSS---PEYISTKDPSINQVASPVAAPEPVGAILPKGVF
                *:**.:****   *:.********   .* **:.  **: :::.....*.*.*    ** 

AT5G18550.1     SMTSDVSHPEPAETNKGDSASNEAKTSS-----
Sb024977_Sorbi1 ----------PPDTIMRTQTSTSVGSSSPGGGR
                          *.:*    .:*... :**
BoxShade v3.31 C (beta, 970507) Output
AT5G18550.1     M E R Y G G A G E D E S R S D P S H E W S A Q G T E - - - - - - - - - T G I E A S M W R L G L R G G G - - - - - - - - G
Sb024977_Sorbi1    M E P - P H A A E E A A A A A A A A G A G G G G G E G G G G G A S P G T G L E G P M L R L G L D G G G E E G E D G E L G
 
AT5G18550.1     G G E T - - - - F P E R P D E P D C I Y Y L R T G V C G Y G S R C R F N H P R N R A P V L - - G G L R T E A G E - F P E
Sb024977_Sorbi1    A G E E A D A R L P E R P G E A D C G Y Y L R T G A C G F G E R C R Y N H P R D R G G T E F G G G A K N G A A Q D F P E
 
AT5G18550.1     R M G Q P V C Q H F M R T G T C K F G A S C K Y H H P R Q G G G G D S V T P V S L N Y M G F P L R P G E K E C S Y F M R
Sb024977_Sorbi1    R Q G Q P V C E Y Y L K T G T C K F G S N C K Y H H P K Q D G - - - S V Q S V I L N N N G F P L R P G E K E C S Y Y M K
 
AT5G18550.1     T G Q C K F G S T C R Y H H P V P P G V Q A P S Q Q Q Q Q Q L S A G P T M Y P S L Q S Q T V P S S Q Q Y G V - - V L A R
Sb024977_Sorbi1    T G Q C K F G S T C K F H H P E F G G I P V T - - - - - - - - - - - P G I Y P P L Q S A S V P S P H T Y A P N W Q M G R
 
AT5G18550.1     P Q L L P G S Y V Q S P Y G Y G Q M V L P P G M V P Y S G W N P Y Q A S V S A M P S P G T Q P S M G T S S V Y G I T P L
Sb024977_Sorbi1    S P A V P G S Y I - - P G S Y T P M M L S S G M V P L Q G W S P Y P A S V T P V A S G G A Q Q T V Q A G P L Y G I G H H
 
AT5G18550.1     - S P S A P A Y Q S G - - - - P S S T G V S N - - - K E Q T F P Q R P E Q P E C Q Y F M R T G D C K F G T S C R F H H P
Sb024977_Sorbi1    G S S T A I A Y G G T Y L P Y S S S T G Q S S N N H Q E H G F P E R P G Q P E C Q Y F M R T G D C K F G N T C K Y N H P
 
AT5G18550.1     M E A A S P E A S T L - S H I G L P L R P G A V P C T H F A Q H G I C K F G P A C K F D H S L G S S S L S Y S P S P S S
Sb024977_Sorbi1    R D W S A P K S N Y M F S H L C L P L R P G A Q P C A Y Y A Q N G Y C R Y G V A C K Y D H P M G - - T L G Y S S S A L P
 
AT5G18550.1     L T D M P V A P Y P S - - S L G T L A P S S S S D Q C T E L I S S S - - S I E P I T T T T G G S E T V A A - - - - G V S
Sb024977_Sorbi1    L S D M S I A P Y P I G F S V A T L A P S S S S - - - P E Y I S T K D P S I N Q V A S P V A A P E P V G A I L P K G V F
 
AT5G18550.1     S M T S D V S H P E P A E T N K G D S A S N E A K T S S - - - - -
Sb024977_Sorbi1    - - - - - - - - - - P P D T I M R T Q T S T S V G S S S P G G G R
 
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