fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024977 GLEGPMLRLGLDGGGE in 41/646 AT2G47850.3 1st_not 0.426966292 II
Sb024976 not found in 661aa AT2G47850.3 not_not 0.420724094 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G18550.1     ----------------------------------MERYGGAGEDESRSDPS------HEW
Sb024976_Sorbi1 GSLACSSFDRASRSARQAPDRPRSGSFRRGPCRRMEPYAAAK------------------
Sb024977_Sorbi1 ----------------------------------MEPPHAAEEAAAAAAAAGAGGGGGEG
                                                  **   .*                   

AT5G18550.1     SAQGTE--TGIEASMWRLGLRGG---GGGGE---------TFPERPDEPDCIYYLRTGVC
Sb024976_Sorbi1 -GGGADAGTGLEESMRRLGL------GDDGE--PGEE---KLPERPGEADCAYYLRTGAC
Sb024977_Sorbi1 GGGGASPGTGLEGPMLRLGLDGGGEEGEDGELGAGEEADARLPERPGEADCGYYLRTGAC
                 . *:.  **:* .* ****      * .**          :****.*.** ******.*

AT5G18550.1     GYGSRCRFNHPRNRAPVLGGLRTEAGE---FPERMGQPVCQHFMRTGTCKFGASCKYHHP
Sb024976_Sorbi1 GYGERCRYNHPRDRPPPVNGVGKTAGMVE-YPERPGQPLCEYYAKNGTCKFGSNCKFDHP
Sb024977_Sorbi1 GFGERCRYNHPRDRGGTEFGGGAKNGAAQDFPERQGQPVCEYYLKTGTCKFGSNCKYHHP
                *:*.***:****:*     *     *    :*** ***:*::: :.******:.**:.**

AT5G18550.1     RQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQQQ
Sb024976_Sorbi1 REGG---FV-PVTLNSSGFPLRLGEKECSYYMKTGHCKFGSTCKFHHP-----------E
Sb024977_Sorbi1 KQDG---SVQSVILNNNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHP-----------E
                ::.*    * .* **  ***** *******:*:**:*******::***           :

AT5G18550.1     QQQLSAGPTMYPSLQSQTVPSSQQYG----VVLARPQLLPGSYVQSPYGYGQMVLPPGMV
Sb024976_Sorbi1 VGFLSETPGMYPPVQPSPISSSHPYPHLANWQMGRPPVVPGSFL--PGSYPPMMLPPTVM
Sb024977_Sorbi1 FGGIPVTPGIYPPLQSASVPSPHTYA--PNWQMGRSPAVPGSYI--PGSYTPMMLSSGMV
                   :.  * :**.:*. .:.*.: *       :.*.  :***::  * .*  *:*.. ::

AT5G18550.1     PYSGWNPYQASVSAMPSPGTQPSMGTSSVYGITPLSPSAP-----AYQSGPSSTGVSN--
Sb024976_Sorbi1 PMQGWNPYVSPMNQVTPAGGQQAVPAGASYGLSHQGPTSAMTYGSHYAQLYSSSGTSSSN
Sb024977_Sorbi1 PLQGWSPYPASVTPVASGGAQQTVQAGPLYGIGHHGSSTAIAYGGTYLPYSSSTGQSSNN
                * .**.** :.:. :.. * * :: :.. **:   ..::.      *    **:* *.  

AT5G18550.1     -KEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEAS-TLSHIGLPLRPGAVP
Sb024976_Sorbi1 IQEYAFPERPGQPECEHYMKTGTCKYGAVCKYHHPQYFSGPKSNYMLSPLGLPLRPGSQP
Sb024977_Sorbi1 HQEHGFPERPGQPECQYFMRTGDCKFGNTCKYNHPRDWSAPKSNYMFSHLCLPLRPGAQP
                 :*  **:** ****:::*:** **:*  *:::**   :.*::.  :* : ******: *

AT5G18550.1     CTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYPSS--LGTLAP----S
Sb024976_Sorbi1 CAYYAHHGFCKFGPTCKFDHPMG--TPNYSISASSLADVPVAPYPHSFPVTPMPPYLPSS
Sb024977_Sorbi1 CAYYAQNGYCRYGVACKYDHPMG--TLGYSSSALPLSDMSIAPYPIGFSVATLAP----S
                *:::*::* *::* :**:**.:*  : .** *. .*:*:.:**** .  : .:.*    *

AT5G18550.1     SSSDQCTELISSSSIEPITTTTGGSETVAAGVSSMTSDVSHPE-----PAETNKGDSASN
Sb024976_Sorbi1 DLRPQYT-LVKDSSANPPPAPGTTYGPVGSM-----SKVYAPHTLIRSPASAAAGMQAS-
Sb024977_Sorbi1 SSSPEYI-STKDPSINQVASPVAAPEPVGAIL---PKGVFPPDTIMRTQTSTSVGSSSPG
                .   :     ...* :  .:.     .*.:      . *  *.      :.:  * .:. 

AT5G18550.1     EAKTSS
Sb024976_Sorbi1 ------
Sb024977_Sorbi1 GGR---
BoxShade v3.31 C (beta, 970507) Output
AT5G18550.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E R Y G G A G E D E S R S D P S - - - - - - H E W
Sb024976_Sorbi1    G S L A C S S F D R A S R S A R Q A P D R P R S G S F R R G P C R R M E P Y A A A K - - - - - - - - - - - - - - - - - -
Sb024977_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E P P H A A E E A A A A A A A A G A G G G G G E G
 
AT5G18550.1     S A Q G T E - - T G I E A S M W R L G L R G G - - - G G G G E - - - - - - - - - T F P E R P D E P D C I Y Y L R T G V C
Sb024976_Sorbi1    - G G G A D A G T G L E E S M R R L G L - - - - - - G D D G E - - P G E E - - - K L P E R P G E A D C A Y Y L R T G A C
Sb024977_Sorbi1    G G G G A S P G T G L E G P M L R L G L D G G G E E G E D G E L G A G E E A D A R L P E R P G E A D C G Y Y L R T G A C
 
AT5G18550.1     G Y G S R C R F N H P R N R A P V L G G L R T E A G E - - - F P E R M G Q P V C Q H F M R T G T C K F G A S C K Y H H P
Sb024976_Sorbi1    G Y G E R C R Y N H P R D R P P P V N G V G K T A G M V E - Y P E R P G Q P L C E Y Y A K N G T C K F G S N C K F D H P
Sb024977_Sorbi1    G F G E R C R Y N H P R D R G G T E F G G G A K N G A A Q D F P E R Q G Q P V C E Y Y L K T G T C K F G S N C K Y H H P
 
AT5G18550.1     R Q G G G G D S V T P V S L N Y M G F P L R P G E K E C S Y F M R T G Q C K F G S T C R Y H H P V P P G V Q A P S Q Q Q
Sb024976_Sorbi1    R E G G - - - F V - P V T L N S S G F P L R L G E K E C S Y Y M K T G H C K F G S T C K F H H P - - - - - - - - - - - E
Sb024977_Sorbi1    K Q D G - - - S V Q S V I L N N N G F P L R P G E K E C S Y Y M K T G Q C K F G S T C K F H H P - - - - - - - - - - - E
 
AT5G18550.1     Q Q Q L S A G P T M Y P S L Q S Q T V P S S Q Q Y G - - - - V V L A R P Q L L P G S Y V Q S P Y G Y G Q M V L P P G M V
Sb024976_Sorbi1    V G F L S E T P G M Y P P V Q P S P I S S S H P Y P H L A N W Q M G R P P V V P G S F L - - P G S Y P P M M L P P T V M
Sb024977_Sorbi1    F G G I P V T P G I Y P P L Q S A S V P S P H T Y A - - P N W Q M G R S P A V P G S Y I - - P G S Y T P M M L S S G M V
 
AT5G18550.1     P Y S G W N P Y Q A S V S A M P S P G T Q P S M G T S S V Y G I T P L S P S A P - - - - - A Y Q S G P S S T G V S N - -
Sb024976_Sorbi1    P M Q G W N P Y V S P M N Q V T P A G G Q Q A V P A G A S Y G L S H Q G P T S A M T Y G S H Y A Q L Y S S S G T S S S N
Sb024977_Sorbi1    P L Q G W S P Y P A S V T P V A S G G A Q Q T V Q A G P L Y G I G H H G S S T A I A Y G G T Y L P Y S S S T G Q S S N N
 
AT5G18550.1     - K E Q T F P Q R P E Q P E C Q Y F M R T G D C K F G T S C R F H H P M E A A S P E A S - T L S H I G L P L R P G A V P
Sb024976_Sorbi1    I Q E Y A F P E R P G Q P E C E H Y M K T G T C K Y G A V C K Y H H P Q Y F S G P K S N Y M L S P L G L P L R P G S Q P
Sb024977_Sorbi1    H Q E H G F P E R P G Q P E C Q Y F M R T G D C K F G N T C K Y N H P R D W S A P K S N Y M F S H L C L P L R P G A Q P
 
AT5G18550.1     C T H F A Q H G I C K F G P A C K F D H S L G S S S L S Y S P S P S S L T D M P V A P Y P S S - - L G T L A P - - - - S
Sb024976_Sorbi1    C A Y Y A H H G F C K F G P T C K F D H P M G - - T P N Y S I S A S S L A D V P V A P Y P H S F P V T P M P P Y L P S S
Sb024977_Sorbi1    C A Y Y A Q N G Y C R Y G V A C K Y D H P M G - - T L G Y S S S A L P L S D M S I A P Y P I G F S V A T L A P - - - - S
 
AT5G18550.1     S S S D Q C T E L I S S S S I E P I T T T T G G S E T V A A G V S S M T S D V S H P E - - - - - P A E T N K G D S A S N
Sb024976_Sorbi1    D L R P Q Y T - L V K D S S A N P P P A P G T T Y G P V G S M - - - - - S K V Y A P H T L I R S P A S A A A G M Q A S -
Sb024977_Sorbi1    S S S P E Y I - S T K D P S I N Q V A S P V A A P E P V G A I L - - - P K G V F P P D T I M R T Q T S T S V G S S S P G
 
AT5G18550.1     E A K T S S
Sb024976_Sorbi1    - - - - - -
Sb024977_Sorbi1    G G R - - -
 
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