fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18560.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042394 not found in 341aa AT5G18560.1 1st_1st 0.306188925 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18560.1     MSTSKTLDHNKPFE---TSQTQMGFALIHQNTSANTTTTTTTGERRGRRSKQAEPGRFLG
pt042394_POPTR_ MSTSKTFD--KPLEGYDTLNIHAGFALLQRN-----TTPPQTGERRGRR-KQAEPGRFLG
                ******:*  **:*   * : : ****:::*     **.. ******** **********

AT5G18560.1     VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFVYTPTDV
pt042394_POPTR_ VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFNYS----
                ********************************************:******** *:    

AT5G18560.1     HTILTNPNLHSLIVSPYNNNQSFLPNSSPQFVIDHHPHYQNYHQPQQPKHTLPQTVLPAA
pt042394_POPTR_ ----DNTTFHSLL-TPF-DIQAFLPQS--QFLTN--------TQIKQPTNQ---------
                     *..:***: :*: : *:***:*  **: :         * :**.:          

AT5G18560.1     SFKTPVRHQSVDIQAFGNSPQNSSSNGSLSSSLD----EENNFFFSLTSEEHNKSNNNSG
pt042394_POPTR_ --SSPVKLETCQ-----NMTPNQSSSDTYAESSDGSAHETNSFFFS-------NEDSNSG
                  .:**: :: :     * . *.**..: :.* *    * *.****       :.:.***

AT5G18560.1     YLDCIVPNHCLKPPPEATTTQ--------NQAGASFT--------------------TPV
pt042394_POPTR_ YLGCIVPDNCLRPPPSSTSSKTTKSNASNDQYSCSMTASTSLEDHSQCNKYAPPLEITNV
                **.****::**:***.:*:::        :* ..*:*                    * *

AT5G18560.1     ASKASEP--YGGFSNSYFEDGEMMMMNHHEFG--------SCDLSAMITNYGAAAASMSM
pt042394_POPTR_ PTKAYTPGNFPGFDE----------LNHGFWGDQLSWDGNSGDLSAMMNN------PLMV
                .:**  *  : **.:          :**  :*        * *****:.*      .: :

AT5G18560.1     ED--------------YGMMEPQ---DLSSSSIA--AFGDVVADTTGF-YSVF
pt042394_POPTR_ ENVCMDTLYSVDNPPTYGLM-PQATSSVSSSSLSYPAYGDAV----NFGYSLF
                *:              **:* **   .:****::  *:**.*    .* **:*
BoxShade v3.31 C (beta, 970507) Output
AT5G18560.1     M S T S K T L D H N K P F E - - - T S Q T Q M G F A L I H Q N T S A N T T T T T T T G E R R G R R S K Q A E P G R F L G
pt042394_POPTR_    M S T S K T F D - - K P L E G Y D T L N I H A G F A L L Q R N - - - - - T T P P Q T G E R R G R R - K Q A E P G R F L G
 
AT5G18560.1     V R R R P W G R Y A A E I R D P T T K E R H W L G T F D T A H E A A L A Y D R A A L S M R G T Q A R T N F V Y T P T D V
pt042394_POPTR_    V R R R P W G R Y A A E I R D P T T K E R H W L G T F D T A H E A A L A Y D R A A L S M K G T Q A R T N F N Y S - - - -
 
AT5G18560.1     H T I L T N P N L H S L I V S P Y N N N Q S F L P N S S P Q F V I D H H P H Y Q N Y H Q P Q Q P K H T L P Q T V L P A A
pt042394_POPTR_    - - - - D N T T F H S L L - T P F - D I Q A F L P Q S - - Q F L T N - - - - - - - - T Q I K Q P T N Q - - - - - - - - -
 
AT5G18560.1     S F K T P V R H Q S V D I Q A F G N S P Q N S S S N G S L S S S L D - - - - E E N N F F F S L T S E E H N K S N N N S G
pt042394_POPTR_    - - S S P V K L E T C Q - - - - - N M T P N Q S S S D T Y A E S S D G S A H E T N S F F F S - - - - - - - N E D S N S G
 
AT5G18560.1     Y L D C I V P N H C L K P P P E A T T T Q - - - - - - - - N Q A G A S F T - - - - - - - - - - - - - - - - - - - - T P V
pt042394_POPTR_    Y L G C I V P D N C L R P P P S S T S S K T T K S N A S N D Q Y S C S M T A S T S L E D H S Q C N K Y A P P L E I T N V
 
AT5G18560.1     A S K A S E P - - Y G G F S N S Y F E D G E M M M M N H H E F G - - - - - - - - S C D L S A M I T N Y G A A A A S M S M
pt042394_POPTR_    P T K A Y T P G N F P G F D E - - - - - - - - - - L N H G F W G D Q L S W D G N S G D L S A M M N N - - - - - - P L M V
 
AT5G18560.1     E D - - - - - - - - - - - - - - Y G M M E P Q - - - D L S S S S I A - - A F G D V V A D T T G F - Y S V F
pt042394_POPTR_    E N V C M D T L Y S V D N P P T Y G L M - P Q A T S S V S S S S L S Y P A Y G D A V - - - - N F G Y S L F
 
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