fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18560.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019422 not found in 297aa AT5G18560.1 1st_1st 0.294788273 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18560.1     MSTSKTLDHNKPF---ETSQTQMGFALIHQNTSANTTTTTTTGERRGRRSKQAEPGRFLG
gm019422_Glyma0 MSTSRT-SSDTPFKGYDPSQTQMCLSLLQRNTSP-------CGERRGRR-KQAEPGRFLG
                ****:* . :.**   :.***** ::*:::***.        ******* **********

AT5G18560.1     VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFVYTPTDV
gm019422_Glyma0 VRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFVYS----
                ******************************:*************:*:********:    

AT5G18560.1     HTILTNPNLHSLIVSPYN-NNQSFLPNSSPQFV------IDHHPHYQNYHQPQQPKHTLP
gm019422_Glyma0 ----DNINFHTLQLSPMNVQVQPLLPAS--QFLTTTTTQTNQNSHFQVIHS---------
                     * *:*:* :** * : *.:** *  **:       :::.*:*  *.         

AT5G18560.1     QTVLPAASFKTPVRHQSVDIQAFGN-SPQNSSSNGSLSSSLDEENNFFFSLTSEEHNKSN
gm019422_Glyma0 ----------TP---------NCGNPSPLNNDMCVETTYGSAQDDNFFFS--------SD
                          **           ** ** *..   . : .  :::*****        *:

AT5G18560.1     NNSGYLDCIVPNHCLKPPPEATTTQNQAGASFTTPVASKASEPYGGF---SNSYFEDGEM
gm019422_Glyma0 SNSGYLECIVPDDCFRP---ASSSSNKG-----IEMAPRASYNFSDFCYQSESW------
                .*****:****:.*::*   *:::.*:.       :*.:**  :..*   *:*:      

AT5G18560.1     MMMNHHEFGSCDLSAMITN-----YGAAAASMSMED-----YGMMEPQDLSSS----SIA
gm019422_Glyma0 ------DWNSSELSAIFKNPMRVENGCMDALCPINDSPSSSYGLMNEAASSSTTCSPSLP
                      ::.*.:***::.*      *.  *  .::*     **:*:    **:    *:.

AT5G18560.1     AFGDVVADTTGFYSVF
gm019422_Glyma0 PFGDVDLG----YPLF
                .****  .    *.:*
BoxShade v3.31 C (beta, 970507) Output
AT5G18560.1     M S T S K T L D H N K P F - - - E T S Q T Q M G F A L I H Q N T S A N T T T T T T T G E R R G R R S K Q A E P G R F L G
gm019422_Glyma0    M S T S R T - S S D T P F K G Y D P S Q T Q M C L S L L Q R N T S P - - - - - - - C G E R R G R R - K Q A E P G R F L G
 
AT5G18560.1     V R R R P W G R Y A A E I R D P T T K E R H W L G T F D T A H E A A L A Y D R A A L S M R G T Q A R T N F V Y T P T D V
gm019422_Glyma0    V R R R P W G R Y A A E I R D P T T K E R H W L G T F D T A Q E A A L A Y D R A A L S M K G S Q A R T N F V Y S - - - -
 
AT5G18560.1     H T I L T N P N L H S L I V S P Y N - N N Q S F L P N S S P Q F V - - - - - - I D H H P H Y Q N Y H Q P Q Q P K H T L P
gm019422_Glyma0    - - - - D N I N F H T L Q L S P M N V Q V Q P L L P A S - - Q F L T T T T T Q T N Q N S H F Q V I H S - - - - - - - - -
 
AT5G18560.1     Q T V L P A A S F K T P V R H Q S V D I Q A F G N - S P Q N S S S N G S L S S S L D E E N N F F F S L T S E E H N K S N
gm019422_Glyma0    - - - - - - - - - - T P - - - - - - - - - N C G N P S P L N N D M C V E T T Y G S A Q D D N F F F S - - - - - - - - S D
 
AT5G18560.1     N N S G Y L D C I V P N H C L K P P P E A T T T Q N Q A G A S F T T P V A S K A S E P Y G G F - - - S N S Y F E D G E M
gm019422_Glyma0    S N S G Y L E C I V P D D C F R P - - - A S S S S N K G - - - - - I E M A P R A S Y N F S D F C Y Q S E S W - - - - - -
 
AT5G18560.1     M M M N H H E F G S C D L S A M I T N - - - - - Y G A A A A S M S M E D - - - - - Y G M M E P Q D L S S S - - - - S I A
gm019422_Glyma0    - - - - - - D W N S S E L S A I F K N P M R V E N G C M D A L C P I N D S P S S S Y G L M N E A A S S S T T C S P S L P
 
AT5G18560.1     A F G D V V A D T T G F Y S V F
gm019422_Glyma0    P F G D V D L G - - - - Y P L F
 
0