fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp000633 not found in 474aa AT2G47900.2 1st_not 0.525352112 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18680.1     ------------------------------------------------------MTLRSL
pp000633_Pp1s10 MLASECLTVHGLRRWLKLWLILLKRSLEGIWCEVSRRELGFCKWTMSGQKSSSMMPLKSL
                                                                      *.*:**

AT5G18680.1     ILEMRS-----------------------------------RPHRVVHDLAAAAAADSTS
pp000633_Pp1s10 IREFQEMKGGIGNISRRSFELKFPHHHRGRSSGMVLDESQLRPERVVEQSC---------
                * *::.                                   **.***.: .         

AT5G18680.1     VSSQDYRWSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEI
pp000633_Pp1s10 -------WANMPPELLRDVIQRVEVSE-STWPSRKHVVACAAVCSSWREITKELVRTPEQ
                       *:::* ****::: ***.:: . ****: *****.** .** : :* * .** 

AT5G18680.1     SSKLTFPISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLTNSLTDDGKFLLAACKLKHTT
pp000633_Pp1s10 SGRLTFPIALKQPGPRENTVQCFIKRDRTTSTYQLFLGLPPSLIENGKFLLAARKFRRAT
                *.:*****:*******:. *******:* *.:*:*:***. ** ::******* *::::*

AT5G18680.1     CTDYIISLRSDDMSRRSQAYVGKVRSNFLGTKFTVFDGNLLPSTGAAKLRKSRSYNPAKV
pp000633_Pp1s10 STDYIISLNQEDMSRGSNTYVGKLRSNFLGTKFTIYDSQPPHNRGVASNRSSRRIGSKQL
                .*******..:**** *::****:**********::*.:   . *.*. *.**  .. ::

AT5G18680.1     SAKVPLGSYPVAHITYELNVLGSRGPRKMQCLMDTIPTSTMEPQGVASEPSEFPLLGTRS
pp000633_Pp1s10 TSRVHAGSYNVAHIAYELNVLGTRGPRRMQCMLHTIPMSAMESGGSAPTPTEF----TAS
                :::*  *** ****:*******:****:***::.*** *:**. * *. *:**    * *

AT5G18680.1     T-----------LSRSQSKPLRSSSSHL----------KETPLVLSNKTPRWHEQLRCWC
pp000633_Pp1s10 TLEDTHVAYSGILSSPRSRAAVVDSSTLDCDFVSGPLTKDAPLILKNKAPRWHEQLQCWC
                *           ** .:*:.   .** *          *::**:*.**:*******:***

AT5G18680.1     LNFHGRVTVASVKNFQLVAAGASCGSGTGMSP---ERQSERIILQFGKVGKDMFTMDYGY
pp000633_Pp1s10 LNFRGRVTVASVKNFQLVAA-------TDLPPTNSQNDHDKVLLQFGKIGKDMFTMDYRY
                ***:****************       *.:.*   :.: ::::*****:********* *

AT5G18680.1     PISAFQAFAICLSSFETRIACE
pp000633_Pp1s10 PLSAFQAFAICLSSFDTKLACE
                *:*************:*::***
BoxShade v3.31 C (beta, 970507) Output
AT5G18680.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T L R S L
pp000633_Pp1s10    M L A S E C L T V H G L R R W L K L W L I L L K R S L E G I W C E V S R R E L G F C K W T M S G Q K S S S M M P L K S L
 
AT5G18680.1     I L E M R S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R P H R V V H D L A A A A A A D S T S
pp000633_Pp1s10    I R E F Q E M K G G I G N I S R R S F E L K F P H H H R G R S S G M V L D E S Q L R P E R V V E Q S C - - - - - - - - -
 
AT5G18680.1     V S S Q D Y R W S E I P E E L L R E I L I R V E A A D G G G W P S R R S V V A C A G V C R G W R L L M N E T V V V P E I
pp000633_Pp1s10    - - - - - - - W A N M P P E L L R D V I Q R V E V S E - S T W P S R K H V V A C A A V C S S W R E I T K E L V R T P E Q
 
AT5G18680.1     S S K L T F P I S L K Q P G P R D S L V Q C F I K R N R I T Q S Y H L Y L G L T N S L T D D G K F L L A A C K L K H T T
pp000633_Pp1s10    S G R L T F P I A L K Q P G P R E N T V Q C F I K R D R T T S T Y Q L F L G L P P S L I E N G K F L L A A R K F R R A T
 
AT5G18680.1     C T D Y I I S L R S D D M S R R S Q A Y V G K V R S N F L G T K F T V F D G N L L P S T G A A K L R K S R S Y N P A K V
pp000633_Pp1s10    S T D Y I I S L N Q E D M S R G S N T Y V G K L R S N F L G T K F T I Y D S Q P P H N R G V A S N R S S R R I G S K Q L
 
AT5G18680.1     S A K V P L G S Y P V A H I T Y E L N V L G S R G P R K M Q C L M D T I P T S T M E P Q G V A S E P S E F P L L G T R S
pp000633_Pp1s10    T S R V H A G S Y N V A H I A Y E L N V L G T R G P R R M Q C M L H T I P M S A M E S G G S A P T P T E F - - - - T A S
 
AT5G18680.1     T - - - - - - - - - - - L S R S Q S K P L R S S S S H L - - - - - - - - - - K E T P L V L S N K T P R W H E Q L R C W C
pp000633_Pp1s10    T L E D T H V A Y S G I L S S P R S R A A V V D S S T L D C D F V S G P L T K D A P L I L K N K A P R W H E Q L Q C W C
 
AT5G18680.1     L N F H G R V T V A S V K N F Q L V A A G A S C G S G T G M S P - - - E R Q S E R I I L Q F G K V G K D M F T M D Y G Y
pp000633_Pp1s10    L N F R G R V T V A S V K N F Q L V A A - - - - - - - T D L P P T N S Q N D H D K V L L Q F G K I G K D M F T M D Y R Y
 
AT5G18680.1     P I S A F Q A F A I C L S S F E T R I A C E
pp000633_Pp1s10    P L S A F Q A F A I C L S S F D T K L A C E
 
0