fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041132 not found in 392aa AT2G47900.2 1st_not 0.573239436 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18680.1     -MTLRSLILEMRSRPHRVVH-----DLA---AAAAADSTSVSSQDYRWSEIPEELLREIL
pt041132_POPTR_ MSAIKSII--NRSRSHRVVQYSSAPDLSLFGGGCGAETTSC------WANLPQELLREVL
                  :::*:*   ***.****:     **:   ....*::**       *:::*:*****:*

AT5G18680.1     IRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLV
pt041132_POPTR_ IRIEESE-SSWPPRKNVVACAGVCRSWRDITKELVKVPELSGKLTFPISVKQPGPRDFLL
                **:* :: ..**.*:.*********.** : :* * ***:*.*******:******* *:

AT5G18680.1     QCFIKRNRITQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAY
pt041132_POPTR_ QCFIKRCRSAQTYRLYLGLNNALTEDGKFLLAARKCRRPTCTDYIISLDTDDMSKGSNAY
                ****** * :*:*:*****.*:**:******** * ::.********* :****: *:**

AT5G18680.1     VGKVRSNFLGTKFTVFDGNLLPSTGAAKLRKSRS---YNPAKVSAKVPLGSYPVAHITYE
pt041132_POPTR_ VGKLRSNFLGTKFTVFDGQ--PPHAGAKMTKSRSSRLVNLKQVSPRVPTGNYPVASISYE
                ***:**************:  *. ..**: ****    *  :**.:** *.**** *:**

AT5G18680.1     LNVLGSRGPRKMQCLMDTIPTSTMEPQGVASEPSEF-----------PLLGTRSTLSRS-
pt041132_POPTR_ LNVLGSRGPRRMHCIMDAIPASAIEPGGIAPTQTEFSHHNVDFLPSLPFFRSKSNRVESF
                **********:*:*:**:**:*::** *:*.  :**           *:: ::*.  .* 

AT5G18680.1     QSKPLRSSSSHLKETPLVLSNKTPRWHEQLRCWCLNFHGRVTVASVKNFQLVAAGASCGS
pt041132_POPTR_ QSGSLSSQ----REGALVLKNKAPRWHEQLQCWCLNFHGRVTVASVKNFQLVVSPENGPA
                ** .* *.    :* .***.**:*******:*********************.:  .  :

AT5G18680.1     GTGMSPERQSERIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE
pt041132_POPTR_ G----PEH--ENIILQFGKVGKDLFTMDYRYPISAFQAFALCLSSFDTKIACE
                *    **:  *.***********:***** **********:*****:*:****
BoxShade v3.31 C (beta, 970507) Output
AT5G18680.1     - M T L R S L I L E M R S R P H R V V H - - - - - D L A - - - A A A A A D S T S V S S Q D Y R W S E I P E E L L R E I L
pt041132_POPTR_    M S A I K S I I - - N R S R S H R V V Q Y S S A P D L S L F G G G C G A E T T S C - - - - - - W A N L P Q E L L R E V L
 
AT5G18680.1     I R V E A A D G G G W P S R R S V V A C A G V C R G W R L L M N E T V V V P E I S S K L T F P I S L K Q P G P R D S L V
pt041132_POPTR_    I R I E E S E - S S W P P R K N V V A C A G V C R S W R D I T K E L V K V P E L S G K L T F P I S V K Q P G P R D F L L
 
AT5G18680.1     Q C F I K R N R I T Q S Y H L Y L G L T N S L T D D G K F L L A A C K L K H T T C T D Y I I S L R S D D M S R R S Q A Y
pt041132_POPTR_    Q C F I K R C R S A Q T Y R L Y L G L N N A L T E D G K F L L A A R K C R R P T C T D Y I I S L D T D D M S K G S N A Y
 
AT5G18680.1     V G K V R S N F L G T K F T V F D G N L L P S T G A A K L R K S R S - - - Y N P A K V S A K V P L G S Y P V A H I T Y E
pt041132_POPTR_    V G K L R S N F L G T K F T V F D G Q - - P P H A G A K M T K S R S S R L V N L K Q V S P R V P T G N Y P V A S I S Y E
 
AT5G18680.1     L N V L G S R G P R K M Q C L M D T I P T S T M E P Q G V A S E P S E F - - - - - - - - - - - P L L G T R S T L S R S -
pt041132_POPTR_    L N V L G S R G P R R M H C I M D A I P A S A I E P G G I A P T Q T E F S H H N V D F L P S L P F F R S K S N R V E S F
 
AT5G18680.1     Q S K P L R S S S S H L K E T P L V L S N K T P R W H E Q L R C W C L N F H G R V T V A S V K N F Q L V A A G A S C G S
pt041132_POPTR_    Q S G S L S S Q - - - - R E G A L V L K N K A P R W H E Q L Q C W C L N F H G R V T V A S V K N F Q L V V S P E N G P A
 
AT5G18680.1     G T G M S P E R Q S E R I I L Q F G K V G K D M F T M D Y G Y P I S A F Q A F A I C L S S F E T R I A C E
pt041132_POPTR_    G - - - - P E H - - E N I I L Q F G K V G K D L F T M D Y R Y P I S A F Q A F A L C L S S F D T K I A C E
 
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