fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032660 ACQGAALRLSLAFLDS in 197/692 AT1G25280.1 1st_not 0.502816901 II
SPLIMGLSLMLAGQAE in 382/692
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18680.1     ---MTLRSLILEMR------SRP---------------HR-----VVHDLAAAAAADSTS
Sb032660_Sorbi1 LAKMSFRSIVRDVRDSFGSLSRRSFEVTIAGLSGLTVHHRGKSQSTVHEVC------DTD
                   *::**:: ::*      **                **     .**::.      .*.

AT5G18680.1     VSSQDYRWSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEI
Sb032660_Sorbi1 LIIQESRWANLPPELLRDVIRRLEASE-STWPNRKHVVSCAAVCRAWREMCREIVLSPEF
                :  *: **:::* ****::: *:**:: . **.*: **:**.***.** : .* *: **:

AT5G18680.1     SSKLTFPISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLTNS-LTDDGKFLLAACKLKHT
Sb032660_Sorbi1 CGKLTFPVSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLMENGKFLLSAKRNRKT
                ..*****:*********.::******:: ..:***** *:.: * ::*****:* : ::*

AT5G18680.1     TCTDYIISLRSDDMSRRSQAYVGKVRSNFLGTKFTV------FDGNLLPSTGAAKLRKSR
Sb032660_Sorbi1 TCTEYVISMDAENISRSSSTYIGKLRSNFLGTKFMISDTQPPYNGAVVPHAG----RTSR
                ***:*:**: ::::** *.:*:**:********* :      ::* ::* :*    *.**

AT5G18680.1     SYNPAKVSAKVPLGSYPVAHITYELNVLGSRGPRKMQCLMDTIPTSTMEPQG-VASEPSE
Sb032660_Sorbi1 RFNSKKVSPKVPTGSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASAVEPGGIVPGQPEQ
                 :*. ***.*** *** :*::********:****:*:*:*.:**:*::** * *..:*.:

AT5G18680.1     -FPLL---GTRSTLSRSQSKPL-RS---------SSSHL-----------------KETP
Sb032660_Sorbi1 ILPRALEESFRSTTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGAAIAGDEEGQNKERP
                 :*     . *** * *:*. : **         **:::                 ** *

AT5G18680.1     LVLSNKTPRWHEQLRCWCLNFHGRVTVASVKNFQLVAAGASCGSGTGMSPERQSE-----
Sb032660_Sorbi1 LVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLIAAPSPAPAPAARAPTPSSQPVPQD
                *** **:*******:******:****:********:** :.. : :. :*  .*:     

AT5G18680.1     --RIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE
Sb032660_Sorbi1 QDKIILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
                  :********.******** **:*************:*::***
BoxShade v3.31 C (beta, 970507) Output
AT5G18680.1     - - - M T L R S L I L E M R - - - - - - S R P - - - - - - - - - - - - - - - H R - - - - - V V H D L A A A A A A D S T S
Sb032660_Sorbi1    L A K M S F R S I V R D V R D S F G S L S R R S F E V T I A G L S G L T V H H R G K S Q S T V H E V C - - - - - - D T D
 
AT5G18680.1     V S S Q D Y R W S E I P E E L L R E I L I R V E A A D G G G W P S R R S V V A C A G V C R G W R L L M N E T V V V P E I
Sb032660_Sorbi1    L I I Q E S R W A N L P P E L L R D V I R R L E A S E - S T W P N R K H V V S C A A V C R A W R E M C R E I V L S P E F
 
AT5G18680.1     S S K L T F P I S L K Q P G P R D S L V Q C F I K R N R I T Q S Y H L Y L G L T N S - L T D D G K F L L A A C K L K H T
Sb032660_Sorbi1    C G K L T F P V S L K Q P G P R D G M I Q C F I K R D K S K S T Y H L Y L C L S T A V L M E N G K F L L S A K R N R K T
 
AT5G18680.1     T C T D Y I I S L R S D D M S R R S Q A Y V G K V R S N F L G T K F T V - - - - - - F D G N L L P S T G A A K L R K S R
Sb032660_Sorbi1    T C T E Y V I S M D A E N I S R S S S T Y I G K L R S N F L G T K F M I S D T Q P P Y N G A V V P H A G - - - - R T S R
 
AT5G18680.1     S Y N P A K V S A K V P L G S Y P V A H I T Y E L N V L G S R G P R K M Q C L M D T I P T S T M E P Q G - V A S E P S E
Sb032660_Sorbi1    R F N S K K V S P K V P T G S Y N I A Q V T Y E L N V L G T R G P R R M H C V M H S I P A S A V E P G G I V P G Q P E Q
 
AT5G18680.1     - F P L L - - - G T R S T L S R S Q S K P L - R S - - - - - - - - - S S S H L - - - - - - - - - - - - - - - - - K E T P
Sb032660_Sorbi1    I L P R A L E E S F R S T T S F S K S S I M D R S M D F S S S R D F S S A R F S D I A G G A A I A G D E E G Q N K E R P
 
AT5G18680.1     L V L S N K T P R W H E Q L R C W C L N F H G R V T V A S V K N F Q L V A A G A S C G S G T G M S P E R Q S E - - - - -
Sb032660_Sorbi1    L V L R N K A P R W H E Q L Q C W C L N F R G R V T I A S V K N F Q L I A A P S P A P A P A A R A P T P S S Q P V P Q D
 
AT5G18680.1     - - R I I L Q F G K V G K D M F T M D Y G Y P I S A F Q A F A I C L S S F E T R I A C E
Sb032660_Sorbi1    Q D K I I L Q F G K V A K D M F T M D Y R Y P L S A F Q A F A I C L S S F D T K L A C E
 
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