fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G18680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041730 not found in 385aa AT2G47900.2 1st_not 0.573239436 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G18680.1     MTLRSLILEMRSRPHRVVHDL-AAAAAADSTSVSSQDYRWSEIPEELLREILIRVEAADG
gm041730_Glyma1 ---MCLIRSMRSQSQRVVQEQEEAECVGDSMRQSC----WANMPQELLREVLFRIEASE-
                    .** .***:.:***::   * ...**   *.    *:::*:*****:*:*:**:: 

AT5G18680.1     GGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNR
gm041730_Glyma1 DAWPPRKSVVACAGVCRSWRQITIDIVKTPELSSKITFPISVKQPGPRENLLRCFIKRNR
                ..**.*:**********.** :  : * .**:***:*****:******:.*::*******

AT5G18680.1     ITQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNF
gm041730_Glyma1 SSQTYYLYLSLTNTLAEDGKFLLAARKCRRPTCTDYIISLDADDMSKGSNSYVGKLRSNF
                 :*:*:***.***:*::******** * ::.********* :****: *::****:****

AT5G18680.1     LGTKFTVFDGNLLPSTGAAKLRKSRS---YNPAKVSAKVPLGSYPVAHITYELNVLGSRG
gm041730_Glyma1 LGTKFTIYDGQ--PPHAGAKIMKSRSTRLVNLKQVSPKVPTGNYPVAHISYELNVLGSRG
                ******::**:  *. ..**: ****    *  :**.*** *.******:**********

AT5G18680.1     PRKMQCLMDTIPTSTMEPQGVASEPSE-----------FPLLGTRST-LSRSQSKPLRSS
gm041730_Glyma1 PRRMHCVMDSIPAAAIEPGGVAPVQTEFSLNNIDMFPSFPFFRSKSNRVENSVSGPLVDQ
                **:*:*:**:**::::** ***.  :*           **:: ::*. :..* * ** ..

AT5G18680.1     SSHLKETPLVLSNKTPRWHEQLRCWCLNFHGRVTVASVKNFQLVAAGASCGSGTGMSPER
gm041730_Glyma1 ----KDGMLVLKNKAPRWHEQLQCWCLNFHGRVTIASVKNFQLVASAENRPAG----PEH
                    *:  ***.**:*******:***********:**********:. .  :*    **:

AT5G18680.1     QSERIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFETRIACE
gm041730_Glyma1 --DKIILQFGKVGKDLFTMDYRFPISAFQAFAICLSSFDTKIACE
                  ::***********:***** :***************:*:****
BoxShade v3.31 C (beta, 970507) Output
AT5G18680.1     M T L R S L I L E M R S R P H R V V H D L - A A A A A A D S T S V S S Q D Y R W S E I P E E L L R E I L I R V E A A D G
gm041730_Glyma1    - - - M C L I R S M R S Q S Q R V V Q E Q E E A E C V G D S M R Q S C - - - - W A N M P Q E L L R E V L F R I E A S E -
 
AT5G18680.1     G G W P S R R S V V A C A G V C R G W R L L M N E T V V V P E I S S K L T F P I S L K Q P G P R D S L V Q C F I K R N R
gm041730_Glyma1    D A W P P R K S V V A C A G V C R S W R Q I T I D I V K T P E L S S K I T F P I S V K Q P G P R E N L L R C F I K R N R
 
AT5G18680.1     I T Q S Y H L Y L G L T N S L T D D G K F L L A A C K L K H T T C T D Y I I S L R S D D M S R R S Q A Y V G K V R S N F
gm041730_Glyma1    S S Q T Y Y L Y L S L T N T L A E D G K F L L A A R K C R R P T C T D Y I I S L D A D D M S K G S N S Y V G K L R S N F
 
AT5G18680.1     L G T K F T V F D G N L L P S T G A A K L R K S R S - - - Y N P A K V S A K V P L G S Y P V A H I T Y E L N V L G S R G
gm041730_Glyma1    L G T K F T I Y D G Q - - P P H A G A K I M K S R S T R L V N L K Q V S P K V P T G N Y P V A H I S Y E L N V L G S R G
 
AT5G18680.1     P R K M Q C L M D T I P T S T M E P Q G V A S E P S E - - - - - - - - - - - F P L L G T R S T - L S R S Q S K P L R S S
gm041730_Glyma1    P R R M H C V M D S I P A A A I E P G G V A P V Q T E F S L N N I D M F P S F P F F R S K S N R V E N S V S G P L V D Q
 
AT5G18680.1     S S H L K E T P L V L S N K T P R W H E Q L R C W C L N F H G R V T V A S V K N F Q L V A A G A S C G S G T G M S P E R
gm041730_Glyma1    - - - - K D G M L V L K N K A P R W H E Q L Q C W C L N F H G R V T I A S V K N F Q L V A S A E N R P A G - - - - P E H
 
AT5G18680.1     Q S E R I I L Q F G K V G K D M F T M D Y G Y P I S A F Q A F A I C L S S F E T R I A C E
gm041730_Glyma1    - - D K I I L Q F G K V G K D L F T M D Y R F P I S A F Q A F A I C L S S F D T K I A C E
 
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