fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G19280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042278 not found in 579aa AT5G19280.1 1st_1st 0.571428571 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G19280.1     MAMIGM-NIIG-LFMVLMLLLISLIILFACKPWRYFSRFRSSSRFSSTFKVGDLQRPLIS
pt042278_POPTR_ MAMILQGSIVGVLLLLLMLLLILLLILLACKPWRFFSSLSSPSR---ALKVGDLERPLVL
                ****   .*:* *:::****** *:**:******:** : *.**   ::*****:***: 

AT5G19280.1     DDGNLIQGQTSEVTREYDLEGACYQNDGLLHSSLTEGRFYKQRLPSSSPHFSQGESFVLE
pt042278_POPTR_ DDAN-AHGQSNESTRSNDLEGACGQNEGLLHSPRMHDLVYKQRLPSASLQLNEGDSVVLN
                **.*  :**:.* **. ****** **:*****.  .. .*******:* ::.:*:*.**:

AT5G19280.1     VISEPSDNALVGQTLKLPAEKGSLAEVQTYDWQNNRNENLQYNLEKDRLINLSPRLVEDQ
pt042278_POPTR_ --SDPIEDLSVGQTIRFLSLTERLAEVQTHVRQEDQNPNLKNDLLQD----LAPKAIADQ
                  *:* ::  ****::: : .  ******:  *:::* **: :* :*    *:*: : **

AT5G19280.1     RSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTK
pt042278_POPTR_ RSCLSLEVISGPSCGLRCSVQPTSASRLPLTLGRVS-SDLLLKDSEVSGKHAMINWNADK
                ** * ****:**: **: :*:.**:*:**:.***** *** *********** *.**: *

AT5G19280.1     FKWELVDMGSLNGTLVNSHSISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQNE
pt042278_POPTR_ NKWELVDMGSLNGTFLNSQLISHPDSGSRHRGDPVELSSGDIITLGTTSNVHVHVTSKSE
                 *************::**: ***** ***: *:****:*.********::*:*:::*:.*

AT5G19280.1     FQIPFKIGVASDPMAMRRGGRKLPMEDVCHYKWPLPGANKFGLFCVCDGHGGSGAAQSAI
pt042278_POPTR_ CQTPFGIGIASDPMAFRRGGKKLAMEDVCYYQWPLPGIPQFGVFGICDGHGGVAAAKSAS
                 * ** **:******:****:**.*****:*:*****  :**:* :****** .**:** 

AT5G19280.1     KIIPEVLANILSDSLRKEKVLSKRDASDVLRDMFAKTEARLEEHQYEGCTATVLLVWKDN
pt042278_POPTR_ KMLPEKVASILSDSLIRERVLSQCDASDVLRVAFYQTEANMNNY-YEGCAATVLLVWADS
                *::** :*.****** :*:***: *******  * :***.:::: ****:******* *.

AT5G19280.1     EENFFAQCANLGDSACVIHLGGRYIQMTEDHRVVSLSERKRFQEAGLALRDGETRLFGIN
pt042278_POPTR_ NENLFAQCANVGDSACFMNVDGKQIKMTEDHRVSSYSERLRLNETGVPLRDGETRLYGLN
                :**:******:*****.:::.*: *:******* * *** *::*:*:.********:*:*

AT5G19280.1     LARMLGDKFPKQQDSRFSAEPYISEPLRIDQSSKDVFAVLASDGLWDVVSPKKAVQLVLQ
pt042278_POPTR_ LARMLGDKFLKQQEPRFSSEPYISEAIHINQES-GAFALLASDGFWDVISLKKAAQLVTQ
                ********* ***:.***:******.::*:*.* ..**:*****:***:* ***.*** *

AT5G19280.1     MRDK--ERGRESSAEKIANGLLNEARAMRTKDNTSIIYLDFDTSL--------
pt042278_POPTR_ AKERYFEEGGNIS-EKVANFLLSEAKTLRTKDNTSILFLEFDRKFRISCKVDS
                 :::  *.* : * **:** **.**:::********::*:** .:
BoxShade v3.31 C (beta, 970507) Output
AT5G19280.1     M A M I G M - N I I G - L F M V L M L L L I S L I I L F A C K P W R Y F S R F R S S S R F S S T F K V G D L Q R P L I S
pt042278_POPTR_    M A M I L Q G S I V G V L L L L L M L L L I L L L I L L A C K P W R F F S S L S S P S R - - - A L K V G D L E R P L V L
 
AT5G19280.1     D D G N L I Q G Q T S E V T R E Y D L E G A C Y Q N D G L L H S S L T E G R F Y K Q R L P S S S P H F S Q G E S F V L E
pt042278_POPTR_    D D A N - A H G Q S N E S T R S N D L E G A C G Q N E G L L H S P R M H D L V Y K Q R L P S A S L Q L N E G D S V V L N
 
AT5G19280.1     V I S E P S D N A L V G Q T L K L P A E K G S L A E V Q T Y D W Q N N R N E N L Q Y N L E K D R L I N L S P R L V E D Q
pt042278_POPTR_    - - S D P I E D L S V G Q T I R F L S L T E R L A E V Q T H V R Q E D Q N P N L K N D L L Q D - - - - L A P K A I A D Q
 
AT5G19280.1     R S W L F L E V I A G P A I G L Q H A V N S T S S S K L P V K L G R V S P S D L A L K D S E V S G K H A Q I T W N S T K
pt042278_POPTR_    R S C L S L E V I S G P S C G L R C S V Q P T S A S R L P L T L G R V S - S D L L L K D S E V S G K H A M I N W N A D K
 
AT5G19280.1     F K W E L V D M G S L N G T L V N S H S I S H P D L G S R K W G N P V E L A S D D I I T L G T T T K V Y V R I S S Q N E
pt042278_POPTR_    N K W E L V D M G S L N G T F L N S Q L I S H P D S G S R H R G D P V E L S S G D I I T L G T T S N V H V H V T S K S E
 
AT5G19280.1     F Q I P F K I G V A S D P M A M R R G G R K L P M E D V C H Y K W P L P G A N K F G L F C V C D G H G G S G A A Q S A I
pt042278_POPTR_    C Q T P F G I G I A S D P M A F R R G G K K L A M E D V C Y Y Q W P L P G I P Q F G V F G I C D G H G G V A A A K S A S
 
AT5G19280.1     K I I P E V L A N I L S D S L R K E K V L S K R D A S D V L R D M F A K T E A R L E E H Q Y E G C T A T V L L V W K D N
pt042278_POPTR_    K M L P E K V A S I L S D S L I R E R V L S Q C D A S D V L R V A F Y Q T E A N M N N Y - Y E G C A A T V L L V W A D S
 
AT5G19280.1     E E N F F A Q C A N L G D S A C V I H L G G R Y I Q M T E D H R V V S L S E R K R F Q E A G L A L R D G E T R L F G I N
pt042278_POPTR_    N E N L F A Q C A N V G D S A C F M N V D G K Q I K M T E D H R V S S Y S E R L R L N E T G V P L R D G E T R L Y G L N
 
AT5G19280.1     L A R M L G D K F P K Q Q D S R F S A E P Y I S E P L R I D Q S S K D V F A V L A S D G L W D V V S P K K A V Q L V L Q
pt042278_POPTR_    L A R M L G D K F L K Q Q E P R F S S E P Y I S E A I H I N Q E S - G A F A L L A S D G F W D V I S L K K A A Q L V T Q
 
AT5G19280.1     M R D K - - E R G R E S S A E K I A N G L L N E A R A M R T K D N T S I I Y L D F D T S L - - - - - - - -
pt042278_POPTR_    A K E R Y F E E G G N I S - E K V A N F L L S E A K T L R T K D N T S I L F L E F D R K F R I S C K V D S
 
0