fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G19490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032295 not found in 310aa AT3G12480.1 1st_not 0.419431279 II
Pp018627 not found in 296aa AT5G19490.1 1st_1st 0.414691943 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G19490.1     MKKKLQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAK
pt032295_POPTR_ MKKKLDTRFPAVRIKKIMQTDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK
pp018627_Pp1s35 MKKKLDTRFPAARIKKIMQADEEVGKIAMATPVLISKALELFLQNLCDKTYEITLRRGAK
                *****:*****.*******:**:*******.*:*:*********:**::**::** ****

AT5G19490.1     TVNAFHLKQCVQATNVFDFLRDTVAKVPDLGGSD-TEDQ-SATKRRKVVDGSSCNDEDMI
pt032295_POPTR_ TLNSLHLKQCVQTFNVFDFLREIVSKVPDLGGPDVTGDERAVAKRRKVADDEDNDSDEEC
pp018627_Pp1s35 TMNSFHLKQCVQTNSVFDFLQEIVSKVPDLGTET-TCDERNGGKRRKQSDGDDSDEEEVV
                *:*::*******: .*****:: *:******    * *:    ****  *... :.::  

AT5G19490.1     KTTQMHE---VKHTSCGRGR-RGRGRGRSSGRTGSG------LSLKFEEDLEDGSPESSR
pt032295_POPTR_ SRNRTNETIQTSSSGRGRGRGRGRGRGRGRGRG--------TRSMERETAAQHGKFED--
pp018627_Pp1s35 KRPKSEE---QSASGRGRGRGRGRGRGRGRGRGSNGTPSTRTIGVEKAEDSDDAEMDTY-
                .  : .*    . :. **** *******. **           .::     :... :   

AT5G19490.1     TPSPENGSLSHDDTSWKKVASHNNHHSSN---------SEVKVRNFDLNVELDENG----
pt032295_POPTR_ DPDIDHHN---DKHCPKLDKDYEPKDSKDNIP--AGRNLQAPVRDFDLNAGLDENGETQP
pp018627_Pp1s35 SPSPDRANIILDPIVHKAIPKPEEAVSANPSPTSSGPSKSPKVLDFDLNMDLDENGE---
                 *. :. .   *    *   . :   * :          .  * :****  *****    

AT5G19490.1     -------------------------------DNATWLETQLERSPDYP----LEINEMKI
pt032295_POPTR_ VLASVPSSFSTKSDTGVPASSLTKPDTVVPASSSTKPTPELKHE-EVPGWSLEDIEKMDI
pp018627_Pp1s35 ----------------IPAG----------ADEATAKEEEIEL--DGP----SNVPTQDL
                                               ..:*    :::   : *     ::   .:

AT5G19490.1     DPDDQQ--------QASA------SDEEDYDEESIDQE
pt032295_POPTR_ NP-----------VQLANLNTRIDEEEEDYDEEDCSY-
pp018627_Pp1s35 DVDSEHVLGCTLHLQRSELCPSVHSDEDDYDCEDDG--
                :             * :       .:*:*** *. .
BoxShade v3.31 C (beta, 970507) Output
AT5G19490.1     M K K K L Q T R F P A T R I K K I M Q T D E E V G K I A M A V P L L V S K A L E L F L Q D L C N H T Y D V T L S R G A K
pt032295_POPTR_    M K K K L D T R F P A V R I K K I M Q T D E D V G K I A M A V P L L V S K A L E L F L Q D L C D R T Y E I T L K R G A K
pp018627_Pp1s35    M K K K L D T R F P A A R I K K I M Q A D E E V G K I A M A T P V L I S K A L E L F L Q N L C D K T Y E I T L R R G A K
 
AT5G19490.1     T V N A F H L K Q C V Q A T N V F D F L R D T V A K V P D L G G S D - T E D Q - S A T K R R K V V D G S S C N D E D M I
pt032295_POPTR_    T L N S L H L K Q C V Q T F N V F D F L R E I V S K V P D L G G P D V T G D E R A V A K R R K V A D D E D N D S D E E C
pp018627_Pp1s35    T M N S F H L K Q C V Q T N S V F D F L Q E I V S K V P D L G T E T - T C D E R N G G K R R K Q S D G D D S D E E E V V
 
AT5G19490.1     K T T Q M H E - - - V K H T S C G R G R - R G R G R G R S S G R T G S G - - - - - - L S L K F E E D L E D G S P E S S R
pt032295_POPTR_    S R N R T N E T I Q T S S S G R G R G R G R G R G R G R G R G R G - - - - - - - - T R S M E R E T A A Q H G K F E D - -
pp018627_Pp1s35    K R P K S E E - - - Q S A S G R G R G R G R G R G R G R G R G R G S N G T P S T R T I G V E K A E D S D D A E M D T Y -
 
AT5G19490.1     T P S P E N G S L S H D D T S W K K V A S H N N H H S S N - - - - - - - - - S E V K V R N F D L N V E L D E N G - - - -
pt032295_POPTR_    D P D I D H H N - - - D K H C P K L D K D Y E P K D S K D N I P - - A G R N L Q A P V R D F D L N A G L D E N G E T Q P
pp018627_Pp1s35    S P S P D R A N I I L D P I V H K A I P K P E E A V S A N P S P T S S G P S K S P K V L D F D L N M D L D E N G E - - -
 
AT5G19490.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D N A T W L E T Q L E R S P D Y P - - - - L E I N E M K I
pt032295_POPTR_    V L A S V P S S F S T K S D T G V P A S S L T K P D T V V P A S S S T K P T P E L K H E - E V P G W S L E D I E K M D I
pp018627_Pp1s35    - - - - - - - - - - - - - - - - I P A G - - - - - - - - - - A D E A T A K E E E I E L - - D G P - - - - S N V P T Q D L
 
AT5G19490.1     D P D D Q Q - - - - - - - - Q A S A - - - - - - S D E E D Y D E E S I D Q E
pt032295_POPTR_    N P - - - - - - - - - - - V Q L A N L N T R I D E E E E D Y D E E D C S Y -
pp018627_Pp1s35    D V D S E H V L G C T L H L Q R S E L C P S V H S D E D D Y D C E D D G - -
 
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